Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162239 |
| length | 316 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G141146 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39560879 ~ 39561194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161831 | lncRNA | upstream | 10106 | 39516493 ~ 39550773 (+) | True | G140804 |
| TU161865 | lncRNA | upstream | 58569 | 39502087 ~ 39502310 (+) | True | G140834 |
| TU161836 | lncRNA | upstream | 122295 | 39437955 ~ 39438584 (+) | True | G140809 |
| TU161818 | lncRNA | upstream | 130570 | 39430099 ~ 39430309 (+) | True | G140794 |
| TU161817 | lncRNA | upstream | 138199 | 39422358 ~ 39422680 (+) | True | G140793 |
| TU162241 | lncRNA | downstream | 1241 | 39562435 ~ 39562737 (+) | True | G141148 |
| TU162331 | lncRNA | downstream | 135167 | 39696361 ~ 39699522 (+) | True | G141226 |
| TU162351 | lncRNA | downstream | 163969 | 39725163 ~ 39725428 (+) | True | G141245 |
| TU162354 | lncRNA | downstream | 167566 | 39728760 ~ 39728997 (+) | True | G141248 |
| TU162368 | lncRNA | downstream | 181228 | 39742422 ~ 39742703 (+) | True | G141260 |
| XM_021562327.2 | mRNA | upstream | 13516 | 39540706 ~ 39547363 (+) | True | LOC110489590 |
| XM_021562317.2 | mRNA | upstream | 30021 | 39527602 ~ 39530858 (+) | True | LOC110489581 |
| XM_021562306.2 | mRNA | upstream | 35948 | 39521563 ~ 39524931 (+) | True | LOC110489572 |
| XM_021562281.2 | mRNA | upstream | 40257 | 39500145 ~ 39520622 (+) | False | LOC110489537 |
| XM_021562261.2 | mRNA | upstream | 40257 | 39503341 ~ 39520622 (+) | False | LOC110489537 |
| XM_036948220.1 | mRNA | downstream | 8291 | 39569485 ~ 39766378 (+) | False | znf407 |
| XM_036948222.1 | mRNA | downstream | 8327 | 39569521 ~ 39766378 (+) | False | znf407 |
| XM_036948223.1 | mRNA | downstream | 10145 | 39571339 ~ 39766378 (+) | False | znf407 |
| XM_021562345.2 | mRNA | downstream | 260686 | 39821880 ~ 39862520 (+) | True | LOC110489609 |
| XR_005036684.1 | mRNA | downstream | 554764 | 40115958 ~ 40222642 (+) | False | LOC110489640 |
| TU160072 | other | upstream | 1509135 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1616867 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1620165 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1638809 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 1978101 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2407180 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2407180 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 2949136 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4169678 | 43730872 ~ 43731218 (+) | True | G146054 |
