RNA id: TU164093



Basic Information


Item Value
RNA id TU164093
length 207
lncRNA type antisense_over
GC content 0.42
exon number 1
gene id G142881
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40798363 ~ 40798569 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CATGGCTCTCATGTTGTTCTCGGGCAGCAGAGGGATCTCCAGCACCTTGGTGTTGGACTGCAGGGCCTCGTGGCTGGCGGTAGAGACAGTCTTGCCCGTGATGCGGTGGACCTGGTAGAAGGCGTGCGGTCGCAGGAGGCGGTCGTCTGCGGTCCCGATGAACAGCTGCAGGGTAAGGGGCTCGCTCTCCATGTAACCGTAAAGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164092 lncRNA downstream 181 40797970 ~ 40798182 (-) True G142880
TU164089 lncRNA downstream 1718 40796417 ~ 40796645 (-) True G142877
TU164081 lncRNA downstream 12035 40785254 ~ 40786328 (-) True G142869
TU164079 lncRNA downstream 16767 40781017 ~ 40781596 (-) True G142867
TU164077 lncRNA downstream 17725 40777517 ~ 40780638 (-) True G142865
TU164098 lncRNA upstream 5639 40804208 ~ 40804523 (-) True G142886
TU164100 lncRNA upstream 7014 40805583 ~ 40805818 (-) True G142888
TU164105 lncRNA upstream 14003 40812572 ~ 40812871 (-) True G142893
TU164112 lncRNA upstream 27875 40826444 ~ 40827101 (-) True G142900
TU164115 lncRNA upstream 31946 40830515 ~ 40830739 (-) True G142902
XR_005036687.1 mRNA downstream 500030 40225527 ~ 40298333 (-) False LOC110489653
XM_021562506.2 mRNA upstream 55646 40854215 ~ 40859593 (-) False LOC110489712
XM_036948344.1 mRNA upstream 55646 40854215 ~ 40859666 (-) False LOC110489712
XM_021562497.2 mRNA upstream 55646 40854215 ~ 40861194 (-) True LOC110489712
XM_036948417.1 mRNA upstream 69320 40867889 ~ 40907134 (-) False LOC110489774
XM_036948420.1 mRNA upstream 69320 40867889 ~ 40907134 (-) False LOC110489774
TU163223 other downstream 556959 40224622 ~ 40241404 (-) False LOC110489653
TU163224 other downstream 556959 40224622 ~ 40241404 (-) False LOC110489653
TU163225 other downstream 556959 40224622 ~ 40241404 (-) False LOC110489653
TU162491 other downstream 1032890 39764507 ~ 39765473 (-) True G141363
TU162490 other downstream 1033193 39764507 ~ 39765170 (-) False G141363
TU164135 other upstream 64645 40863214 ~ 40863721 (-) True G142918
TU165059 other upstream 915977 41714546 ~ 41730422 (-) True LOC110489860
TU166468 other upstream 1908249 42706818 ~ 42707279 (-) True G145010
TU167289 other upstream 2472148 43270717 ~ 43272516 (-) True G145767
TU167341 other upstream 2574271 43372840 ~ 43392129 (-) True LOC110490183

Expression Profile