Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU163941 |
| length | 625 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G142737 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 40941178 ~ 40941802 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU163908 | lncRNA | upstream | 490 | 40937352 ~ 40940688 (+) | False | G142706 |
| TU163909 | lncRNA | upstream | 490 | 40937373 ~ 40940688 (+) | True | G142706 |
| TU163910 | lncRNA | upstream | 12696 | 40928219 ~ 40928482 (+) | True | G142707 |
| TU163939 | lncRNA | upstream | 14544 | 40926328 ~ 40926634 (+) | True | G142735 |
| TU163937 | lncRNA | upstream | 16649 | 40924312 ~ 40924529 (+) | True | G142733 |
| TU163942 | lncRNA | downstream | 439 | 40942241 ~ 40942677 (+) | True | G142738 |
| TU163944 | lncRNA | downstream | 1269 | 40943071 ~ 40943488 (+) | False | G142739 |
| TU163943 | lncRNA | downstream | 1350 | 40943152 ~ 40943488 (+) | True | G142739 |
| TU163945 | lncRNA | downstream | 4004 | 40945806 ~ 40946818 (+) | True | G142740 |
| TU163946 | lncRNA | downstream | 5723 | 40947525 ~ 40947727 (+) | True | G142741 |
| XM_021562694.2 | mRNA | upstream | 56038 | 40881174 ~ 40885140 (+) | True | LOC110489783 |
| XM_036948320.1 | mRNA | upstream | 93419 | 40781026 ~ 40847759 (+) | False | LOC110489695 |
| XM_036948326.1 | mRNA | upstream | 93419 | 40783361 ~ 40847759 (+) | False | LOC110489695 |
| XM_021562456.2 | mRNA | upstream | 287796 | 40636099 ~ 40653382 (+) | True | LOC110489685 |
| XM_021562443.2 | mRNA | upstream | 621915 | 40309178 ~ 40319263 (+) | True | galr1a |
| XM_036948451.1 | mRNA | downstream | 352879 | 41294681 ~ 41355200 (+) | False | LOC110489815 |
| XM_036948460.1 | mRNA | downstream | 354588 | 41296390 ~ 41355070 (+) | True | LOC110489815 |
| XM_021562771.2 | mRNA | downstream | 512457 | 41454259 ~ 41460908 (+) | True | LOC110489825 |
| XM_021562780.2 | mRNA | downstream | 597438 | 41539240 ~ 41541654 (+) | False | LOC110489834 |
| XM_021562800.2 | mRNA | downstream | 752635 | 41694437 ~ 41710790 (+) | False | LOC110489853 |
| TU160072 | other | upstream | 2889434 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 2997166 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 3000464 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 3019108 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 597493 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 1026572 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 1026572 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 1568528 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 2789070 | 43730872 ~ 43731218 (+) | True | G146054 |
