Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU165047 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G143779 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 41743519 ~ 41743788 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU165046 | lncRNA | upstream | 970 | 41742373 ~ 41742549 (+) | True | G143778 |
| TU164993 | lncRNA | upstream | 73212 | 41669792 ~ 41670307 (+) | True | G143739 |
| TU164476 | lncRNA | upstream | 345882 | 41397300 ~ 41397637 (+) | True | G143237 |
| TU164475 | lncRNA | upstream | 348412 | 41394853 ~ 41395107 (+) | True | G143236 |
| TU164474 | lncRNA | upstream | 350874 | 41392430 ~ 41392645 (+) | True | G143235 |
| TU165110 | lncRNA | downstream | 48925 | 41792713 ~ 41838218 (+) | True | G143840 |
| TU165132 | lncRNA | downstream | 100187 | 41843975 ~ 41844344 (+) | True | G143860 |
| TU165216 | lncRNA | downstream | 228137 | 41971925 ~ 41972187 (+) | True | G143940 |
| TU165226 | lncRNA | downstream | 251154 | 41994942 ~ 41996046 (+) | False | G143950 |
| TU165227 | lncRNA | downstream | 251154 | 41994942 ~ 41996046 (+) | True | G143950 |
| XM_021562824.2 | mRNA | upstream | 1609 | 41730685 ~ 41741910 (+) | True | LOC110489869 |
| XM_021562800.2 | mRNA | upstream | 32729 | 41694437 ~ 41710790 (+) | False | LOC110489853 |
| XM_036948527.1 | mRNA | upstream | 32729 | 41699259 ~ 41710790 (+) | True | LOC110489853 |
| XM_021562780.2 | mRNA | upstream | 201865 | 41539240 ~ 41541654 (+) | False | LOC110489834 |
| XM_021562771.2 | mRNA | upstream | 282611 | 41454259 ~ 41460908 (+) | True | LOC110489825 |
| XM_021562836.2 | mRNA | downstream | 6251 | 41750039 ~ 41826833 (+) | True | LOC110489877 |
| XM_021562883.2 | mRNA | downstream | 293712 | 42037500 ~ 42039843 (+) | True | LOC110489902 |
| XR_005036748.1 | mRNA | downstream | 323216 | 42067004 ~ 42071284 (+) | False | LOC110489918 |
| XR_005036747.1 | mRNA | downstream | 323216 | 42067004 ~ 42092073 (+) | True | LOC110489918 |
| XM_036948609.1 | mRNA | downstream | 356502 | 42100290 ~ 42141745 (+) | False | LOC110489908 |
| TU164559 | other | upstream | 201928 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU160072 | other | upstream | 3691775 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 3799507 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 3802805 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159974 | other | upstream | 3821449 | 37920391 ~ 37922070 (+) | False | G139089 |
| TU165213 | other | downstream | 224586 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 224586 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 766542 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 1987084 | 43730872 ~ 43731218 (+) | True | G146054 |
| TU167665 | other | downstream | 2024919 | 43768707 ~ 43769162 (+) | True | G146091 |
