Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU165338 |
| length | 255 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G144034 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 42138760 ~ 42139014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU165321 | lncRNA | upstream | 47845 | 42090612 ~ 42090915 (+) | True | G144017 |
| TU165320 | lncRNA | upstream | 49230 | 42089290 ~ 42089530 (+) | True | G144016 |
| TU165316 | lncRNA | upstream | 54646 | 42083621 ~ 42084114 (+) | True | G144012 |
| TU165258 | lncRNA | upstream | 64772 | 42072815 ~ 42073988 (+) | True | G143977 |
| TU165230 | lncRNA | upstream | 135517 | 42002451 ~ 42003243 (+) | True | G143953 |
| TU165295 | lncRNA | downstream | 34 | 42139048 ~ 42217775 (+) | False | LOC110489919 |
| TU165303 | lncRNA | downstream | 34 | 42139048 ~ 42220203 (+) | True | LOC110489919 |
| TU165482 | lncRNA | downstream | 246184 | 42385198 ~ 42385672 (+) | True | G144176 |
| TU165972 | lncRNA | downstream | 262884 | 42401898 ~ 42402244 (+) | True | G144629 |
| TU165977 | lncRNA | downstream | 265863 | 42404877 ~ 42405121 (+) | True | G144634 |
| XR_005036747.1 | mRNA | upstream | 46687 | 42067004 ~ 42092073 (+) | True | LOC110489918 |
| XR_005036748.1 | mRNA | upstream | 67476 | 42067004 ~ 42071284 (+) | False | LOC110489918 |
| XM_021562883.2 | mRNA | upstream | 98917 | 42037500 ~ 42039843 (+) | True | LOC110489902 |
| XM_021562836.2 | mRNA | upstream | 311927 | 41750039 ~ 41826833 (+) | True | LOC110489877 |
| XM_021562824.2 | mRNA | upstream | 396850 | 41730685 ~ 41741910 (+) | True | LOC110489869 |
| XM_021562946.2 | mRNA | downstream | 11316 | 42150330 ~ 42215814 (+) | False | LOC110489919 |
| XM_021562952.2 | mRNA | downstream | 11317 | 42150331 ~ 42215814 (+) | False | LOC110489919 |
| XM_021562971.2 | mRNA | downstream | 11317 | 42150331 ~ 42215814 (+) | False | LOC110489919 |
| XM_021562938.2 | mRNA | downstream | 11317 | 42150331 ~ 42217775 (+) | False | LOC110489919 |
| XM_021562979.2 | mRNA | downstream | 33332 | 42172346 ~ 42215814 (+) | False | LOC110489919 |
| TU165213 | other | upstream | 169443 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | upstream | 169538 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU164559 | other | upstream | 597169 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU160072 | other | upstream | 4087016 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 4194748 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU166008 | other | downstream | 371316 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 1591858 | 43730872 ~ 43731218 (+) | True | G146054 |
| TU167665 | other | downstream | 1629693 | 43768707 ~ 43769162 (+) | True | G146091 |
| TU167688 | other | downstream | 1660390 | 43799404 ~ 43799853 (+) | True | G146114 |
| TU167748 | other | downstream | 1747582 | 43886596 ~ 43889609 (+) | False | G146165 |
