Item | Value |
---|---|
RNA id | TU172227 |
length | 224 |
lncRNA type | inter_gene |
GC content | 0.34 |
exon number | 1 |
gene id | G150313 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 46931101 ~ 46931324 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU172136 | lncRNA | upstream | 54024 | 46872295 ~ 46877077 (+) | True | G150227 |
TU172134 | lncRNA | upstream | 72879 | 46857894 ~ 46858222 (+) | True | G150225 |
TU172120 | lncRNA | upstream | 87898 | 46842891 ~ 46843203 (+) | True | G150211 |
TU172119 | lncRNA | upstream | 88508 | 46842304 ~ 46842593 (+) | True | G150210 |
TU172095 | lncRNA | upstream | 118853 | 46811957 ~ 46812248 (+) | True | G150186 |
TU172231 | lncRNA | downstream | 9857 | 46941181 ~ 46941449 (+) | True | G150317 |
TU172233 | lncRNA | downstream | 11532 | 46942856 ~ 46943090 (+) | True | G150319 |
TU172238 | lncRNA | downstream | 22288 | 46953612 ~ 46953847 (+) | True | G150324 |
TU172258 | lncRNA | downstream | 75015 | 47006339 ~ 47006712 (+) | True | G150339 |
TU172397 | lncRNA | downstream | 282774 | 47214098 ~ 47220529 (+) | True | G150467 |
XM_036949734.1 | mRNA | upstream | 798987 | 45596003 ~ 46132114 (+) | True | brsk2a |
XR_005036955.1 | mRNA | upstream | 1175118 | 45699197 ~ 45755983 (+) | True | LOC118940395 |
XM_021564034.2 | mRNA | upstream | 1462256 | 45444073 ~ 45468845 (+) | True | tsg101a |
XM_021563975.2 | mRNA | upstream | 1675258 | 45203309 ~ 45255843 (+) | False | LOC110490546 |
XM_036949670.1 | mRNA | upstream | 1675258 | 45203320 ~ 45255843 (+) | True | LOC110490546 |
XM_021564096.2 | mRNA | downstream | 34812 | 46966136 ~ 46980755 (+) | True | spty2d1 |
XM_036949756.1 | mRNA | downstream | 50362 | 46981686 ~ 47007672 (+) | False | uevld |
XM_036933601.1 | mRNA | downstream | 202891 | 47134215 ~ 47205441 (+) | False | cpt1ab |
XM_036933595.1 | mRNA | downstream | 203521 | 47134845 ~ 47205441 (+) | False | cpt1ab |
XM_036933608.1 | mRNA | downstream | 203521 | 47134845 ~ 47205441 (+) | False | cpt1ab |
TU169948 | other | upstream | 1438722 | 45472745 ~ 45492379 (+) | True | G148191 |
TU169947 | other | upstream | 1458472 | 45472082 ~ 45472629 (+) | False | G148191 |
TU169210 | other | upstream | 2059601 | 44870800 ~ 44871500 (+) | True | G147510 |
TU168471 | other | upstream | 2501708 | 44429153 ~ 44429393 (+) | True | G146841 |
TU167816 | other | upstream | 2934036 | 43996780 ~ 43997065 (+) | True | G146226 |
TU172245 | other | downstream | 50395 | 46981719 ~ 46985226 (+) | True | uevld |
TU172952 | other | downstream | 566624 | 47497948 ~ 47547579 (+) | True | G150997 |
TU174225 | other | downstream | 1625458 | 48556782 ~ 48557686 (+) | True | G152167 |
TU176287 | other | downstream | 3167092 | 50098416 ~ 50100474 (+) | True | LOC110491026 |
TU177155 | other | downstream | 4234091 | 51165415 ~ 51167174 (+) | True | G154859 |