Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU174711 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G152618 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 48805952 ~ 48806203 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
48,803,600
48,804,000
48,804,400
48,804,800
48,805,200
48,805,600
48,806,000
48,806,400
48,806,800
48,807,200
48,807,600
48,808,000
NC_048566.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU174698 | lncRNA | downstream | 8144 | 48797541 ~ 48797808 (-) | True | G152605 |
| TU174689 | lncRNA | downstream | 11748 | 48793939 ~ 48794204 (-) | True | G152596 |
| TU174687 | lncRNA | downstream | 13871 | 48791752 ~ 48792081 (-) | True | G152594 |
| TU174635 | lncRNA | downstream | 46947 | 48758783 ~ 48759005 (-) | True | G152542 |
| TU174432 | lncRNA | downstream | 144914 | 48659223 ~ 48661038 (-) | True | G152356 |
| TU174727 | lncRNA | upstream | 3708 | 48809911 ~ 48812873 (-) | True | trnas-gcu-2 |
| TU174940 | lncRNA | upstream | 173188 | 48979391 ~ 48979626 (-) | True | G152833 |
| TU175004 | lncRNA | upstream | 236823 | 49043026 ~ 49043255 (-) | True | G152895 |
| TU175685 | lncRNA | upstream | 405399 | 49211602 ~ 49211822 (-) | True | G153535 |
| TU175688 | lncRNA | upstream | 413104 | 49219307 ~ 49219528 (-) | True | G153538 |
| XR_005036983.1 | mRNA | downstream | 94722 | 48701449 ~ 48711230 (-) | True | LOC118940428 |
| XR_005036982.1 | mRNA | downstream | 95901 | 48701449 ~ 48710051 (-) | False | LOC118940428 |
| XM_021564258.2 | mRNA | downstream | 107958 | 48661451 ~ 48697994 (-) | True | ptdss2 |
| XM_021564269.2 | mRNA | downstream | 108032 | 48661451 ~ 48697920 (-) | False | ptdss2 |
| XM_021564277.2 | mRNA | downstream | 108051 | 48661451 ~ 48697901 (-) | False | ptdss2 |
| trnas-gcu | mRNA | upstream | 4149 | 48810352 ~ 48810433 (-) | True | trnas-gcu |
| trnas-gcu-2 | mRNA | upstream | 5268 | 48811471 ~ 48811552 (-) | False | trnas-gcu-2 |
| trnas-gcu-3 | mRNA | upstream | 6386 | 48812589 ~ 48812670 (-) | True | trnas-gcu-3 |
| XM_021564287.2 | mRNA | upstream | 269890 | 49076093 ~ 49078840 (-) | False | ifitm5 |
| XM_021564290.2 | mRNA | upstream | 269890 | 49076093 ~ 49078840 (-) | True | ifitm5 |
| TU174069 | other | downstream | 502289 | 48303311 ~ 48303663 (-) | True | G152024 |
| TU173950 | other | downstream | 579008 | 48226299 ~ 48226944 (-) | True | G151920 |
| TU173905 | other | downstream | 617674 | 48187958 ~ 48188278 (-) | True | G151875 |
| TU173467 | other | downstream | 954604 | 47850785 ~ 47851348 (-) | True | G151474 |
| TU172611 | other | downstream | 1600519 | 47194893 ~ 47205433 (-) | False | G150675 |
| TU176510 | other | upstream | 1295227 | 50101430 ~ 50107447 (-) | False | G154300 |
| TU176505 | other | upstream | 1295350 | 50101553 ~ 50106737 (-) | True | G154300 |
| TU176559 | other | upstream | 1350483 | 50156686 ~ 50157825 (-) | True | G154338 |
| TU177312 | other | upstream | 1609540 | 50415743 ~ 50452147 (-) | True | G155003 |
| TU177396 | other | upstream | 1773595 | 50579798 ~ 50581349 (-) | True | G155072 |
