Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU174932 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G152825 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 48971338 ~ 48971560 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU174919 | lncRNA | upstream | 12194 | 48958885 ~ 48959144 (+) | True | G152813 |
| TU174760 | lncRNA | upstream | 133400 | 48837714 ~ 48837938 (+) | True | G152660 |
| TU174710 | lncRNA | upstream | 164914 | 48806150 ~ 48806424 (+) | True | G152617 |
| TU174704 | lncRNA | upstream | 168157 | 48802980 ~ 48803181 (+) | True | G152611 |
| TU174684 | lncRNA | upstream | 179663 | 48791476 ~ 48791675 (+) | True | G152591 |
| TU174939 | lncRNA | downstream | 5386 | 48976946 ~ 48977176 (+) | True | G152832 |
| TU174947 | lncRNA | downstream | 17551 | 48989111 ~ 49018416 (+) | True | G152840 |
| TU174999 | lncRNA | downstream | 67538 | 49039098 ~ 49039302 (+) | True | G152890 |
| TU175020 | lncRNA | downstream | 89853 | 49061413 ~ 49061674 (+) | True | G152911 |
| TU175022 | lncRNA | downstream | 91956 | 49063516 ~ 49063752 (+) | True | G152913 |
| XM_021564280.2 | mRNA | upstream | 232787 | 48736519 ~ 48738551 (+) | True | cdkn1cb |
| XM_021564236.2 | mRNA | upstream | 469458 | 48481528 ~ 48501880 (+) | True | prr5l |
| XM_021564195.2 | mRNA | upstream | 523551 | 48394983 ~ 48447787 (+) | True | fcsk |
| XR_005036978.1 | mRNA | upstream | 554280 | 48412707 ~ 48417058 (+) | True | LOC118940424 |
| XM_036949799.1 | mRNA | upstream | 837364 | 48083781 ~ 48133974 (+) | True | osbpl5 |
| XM_021564368.2 | mRNA | downstream | 777553 | 49749113 ~ 49767125 (+) | True | LOC110490948 |
| XM_036949980.1 | mRNA | downstream | 1096649 | 50068209 ~ 50093310 (+) | True | LOC110491010 |
| XM_021564376.2 | mRNA | downstream | 1126827 | 50098387 ~ 50100624 (+) | False | LOC110491026 |
| XM_021564382.2 | mRNA | downstream | 1178901 | 50150461 ~ 50159171 (+) | True | LOC110491039 |
| XM_021564399.2 | mRNA | downstream | 1209740 | 50181300 ~ 50198685 (+) | False | LOC110491040 |
| TU174225 | other | upstream | 413652 | 48556782 ~ 48557686 (+) | True | G152167 |
| TU172952 | other | upstream | 1423759 | 47497948 ~ 47547579 (+) | True | G150997 |
| TU172245 | other | upstream | 1986112 | 46981719 ~ 46985226 (+) | True | uevld |
| TU169948 | other | upstream | 3478959 | 45472745 ~ 45492379 (+) | True | G148191 |
| TU169947 | other | upstream | 3498709 | 45472082 ~ 45472629 (+) | False | G148191 |
| TU176287 | other | downstream | 1126856 | 50098416 ~ 50100474 (+) | True | LOC110491026 |
| TU177155 | other | downstream | 2193855 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU177860 | other | downstream | 2350236 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177846 | other | downstream | 2440706 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177903 | other | downstream | 2449287 | 51420847 ~ 51421122 (+) | True | G155541 |
