Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU178428 |
| length | 386 |
| lncRNA type | antisense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G156027 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 51865472 ~ 51889131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178329 | lncRNA | upstream | 30362 | 51727521 ~ 51835110 (+) | True | G155940 |
| TU178392 | lncRNA | upstream | 45226 | 51816510 ~ 51820246 (+) | False | G156000 |
| TU178396 | lncRNA | upstream | 45226 | 51816573 ~ 51820246 (+) | True | G156000 |
| TU178228 | lncRNA | upstream | 272308 | 51592842 ~ 51593164 (+) | True | G155845 |
| TU177853 | lncRNA | upstream | 363475 | 51430866 ~ 51501997 (+) | True | G155492 |
| TU178453 | lncRNA | downstream | 17040 | 51906171 ~ 51906450 (+) | True | G156050 |
| TU178463 | lncRNA | downstream | 30249 | 51919380 ~ 51919580 (+) | True | G156060 |
| TU178465 | lncRNA | downstream | 32240 | 51921371 ~ 51921572 (+) | True | G156062 |
| TU178469 | lncRNA | downstream | 36345 | 51925476 ~ 51925682 (+) | True | G156066 |
| TU179092 | lncRNA | downstream | 276691 | 52165822 ~ 52166104 (+) | True | G156669 |
| LOC118944140 | mRNA | upstream | 435900 | 51429454 ~ 51429572 (+) | True | LOC118944140 |
| XR_005039449.1 | mRNA | upstream | 443019 | 51422337 ~ 51422453 (+) | True | LOC118944142 |
| LOC118944199 | mRNA | upstream | 443443 | 51421856 ~ 51422029 (+) | True | LOC118944199 |
| XM_021617652.2 | mRNA | upstream | 448318 | 51413140 ~ 51417154 (+) | False | rl28 |
| XM_021617626.2 | mRNA | upstream | 448371 | 51412687 ~ 51417101 (+) | False | rl28 |
| XM_021564725.2 | mRNA | downstream | 1014060 | 52903191 ~ 53018812 (+) | True | cspg4 |
| XM_021564755.2 | mRNA | downstream | 1244366 | 53133497 ~ 53167781 (+) | False | snupn |
| XM_021564748.2 | mRNA | downstream | 1244582 | 53133713 ~ 53167781 (+) | True | snupn |
| XM_021564770.2 | mRNA | downstream | 1315950 | 53205081 ~ 53249227 (+) | False | ptpn9a |
| XM_021564780.2 | mRNA | downstream | 1316755 | 53205886 ~ 53249227 (+) | True | ptpn9a |
| TU178397 | other | upstream | 41290 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 444350 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 448354 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 543039 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 698298 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 2132477 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 2463852 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 2839165 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 4057012 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 4355913 | 56245044 ~ 56252598 (+) | True | G161687 |
