Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU179092 |
| length | 283 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G156669 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52165822 ~ 52166104 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178469 | lncRNA | upstream | 240140 | 51925476 ~ 51925682 (+) | True | G156066 |
| TU178465 | lncRNA | upstream | 244250 | 51921371 ~ 51921572 (+) | True | G156062 |
| TU178463 | lncRNA | upstream | 246242 | 51919380 ~ 51919580 (+) | True | G156060 |
| TU178453 | lncRNA | upstream | 259372 | 51906171 ~ 51906450 (+) | True | G156050 |
| TU178441 | lncRNA | upstream | 268988 | 51883485 ~ 51896834 (+) | True | G156038 |
| TU179179 | lncRNA | downstream | 57412 | 52223516 ~ 52227861 (+) | True | G156756 |
| TU179192 | lncRNA | downstream | 65348 | 52231452 ~ 52231655 (+) | True | G156769 |
| TU179235 | lncRNA | downstream | 92667 | 52258771 ~ 52259069 (+) | True | G156812 |
| TU179251 | lncRNA | downstream | 103691 | 52269795 ~ 52270065 (+) | True | G156828 |
| TU179252 | lncRNA | downstream | 104203 | 52270307 ~ 52270718 (+) | True | G156829 |
| LOC118944140 | mRNA | upstream | 736250 | 51429454 ~ 51429572 (+) | True | LOC118944140 |
| XR_005039449.1 | mRNA | upstream | 743369 | 51422337 ~ 51422453 (+) | True | LOC118944142 |
| LOC118944199 | mRNA | upstream | 743793 | 51421856 ~ 51422029 (+) | True | LOC118944199 |
| XM_021617652.2 | mRNA | upstream | 748668 | 51413140 ~ 51417154 (+) | False | rl28 |
| XM_021617626.2 | mRNA | upstream | 748721 | 51412687 ~ 51417101 (+) | False | rl28 |
| XM_021564725.2 | mRNA | downstream | 737087 | 52903191 ~ 53018812 (+) | True | cspg4 |
| XM_021564755.2 | mRNA | downstream | 967393 | 53133497 ~ 53167781 (+) | False | snupn |
| XM_021564748.2 | mRNA | downstream | 967609 | 53133713 ~ 53167781 (+) | True | snupn |
| XM_021564770.2 | mRNA | downstream | 1038977 | 53205081 ~ 53249227 (+) | False | ptpn9a |
| XM_021564780.2 | mRNA | downstream | 1039782 | 53205886 ~ 53249227 (+) | True | ptpn9a |
| TU178397 | other | upstream | 341640 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 744700 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 748704 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 843389 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 998648 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 1855504 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 2186879 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 2562192 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 3780039 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 4078940 | 56245044 ~ 56252598 (+) | True | G161687 |
