Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU179540 |
| length | 206 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G157111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52480003 ~ 52480208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU179528 | lncRNA | upstream | 11637 | 52468160 ~ 52468366 (+) | True | G157099 |
| TU179524 | lncRNA | upstream | 11932 | 52467566 ~ 52468071 (+) | True | G157095 |
| TU179325 | lncRNA | upstream | 99014 | 52339983 ~ 52380989 (+) | True | G156900 |
| TU179287 | lncRNA | upstream | 185022 | 52294772 ~ 52294981 (+) | True | G156864 |
| TU179281 | lncRNA | upstream | 189801 | 52290000 ~ 52290202 (+) | True | G156858 |
| TU179569 | lncRNA | downstream | 15487 | 52495695 ~ 52495896 (+) | True | G157139 |
| TU179575 | lncRNA | downstream | 17298 | 52497506 ~ 52526149 (+) | True | G157143 |
| TU179597 | lncRNA | downstream | 53542 | 52533750 ~ 52538011 (+) | True | G157165 |
| TU179654 | lncRNA | downstream | 74621 | 52554829 ~ 52555062 (+) | True | G157220 |
| TU179732 | lncRNA | downstream | 121917 | 52602125 ~ 52602332 (+) | True | G157297 |
| LOC118944140 | mRNA | upstream | 1050431 | 51429454 ~ 51429572 (+) | True | LOC118944140 |
| XR_005039449.1 | mRNA | upstream | 1057550 | 51422337 ~ 51422453 (+) | True | LOC118944142 |
| LOC118944199 | mRNA | upstream | 1057974 | 51421856 ~ 51422029 (+) | True | LOC118944199 |
| XM_021617652.2 | mRNA | upstream | 1062849 | 51413140 ~ 51417154 (+) | False | rl28 |
| XM_021617626.2 | mRNA | upstream | 1062902 | 51412687 ~ 51417101 (+) | False | rl28 |
| XM_021564725.2 | mRNA | downstream | 422983 | 52903191 ~ 53018812 (+) | True | cspg4 |
| XM_021564755.2 | mRNA | downstream | 653289 | 53133497 ~ 53167781 (+) | False | snupn |
| XM_021564748.2 | mRNA | downstream | 653505 | 53133713 ~ 53167781 (+) | True | snupn |
| XM_021564770.2 | mRNA | downstream | 724873 | 53205081 ~ 53249227 (+) | False | ptpn9a |
| XM_021564780.2 | mRNA | downstream | 725678 | 53205886 ~ 53249227 (+) | True | ptpn9a |
| TU178397 | other | upstream | 655821 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 1058881 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 1062885 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 1157570 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 1312829 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 1541400 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 1872775 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 2248088 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 3465935 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 3764836 | 56245044 ~ 56252598 (+) | True | G161687 |
