Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU179575 |
| length | 441 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G157143 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52497506 ~ 52526149 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU179569 | lncRNA | upstream | 1610 | 52495695 ~ 52495896 (+) | True | G157139 |
| TU179540 | lncRNA | upstream | 17298 | 52480003 ~ 52480208 (+) | True | G157111 |
| TU179528 | lncRNA | upstream | 29140 | 52468160 ~ 52468366 (+) | True | G157099 |
| TU179524 | lncRNA | upstream | 29435 | 52467566 ~ 52468071 (+) | True | G157095 |
| TU179325 | lncRNA | upstream | 116517 | 52339983 ~ 52380989 (+) | True | G156900 |
| TU179597 | lncRNA | downstream | 7601 | 52533750 ~ 52538011 (+) | True | G157165 |
| TU179654 | lncRNA | downstream | 28680 | 52554829 ~ 52555062 (+) | True | G157220 |
| TU179732 | lncRNA | downstream | 75976 | 52602125 ~ 52602332 (+) | True | G157297 |
| TU179783 | lncRNA | downstream | 107118 | 52633267 ~ 52633530 (+) | True | G157347 |
| TU179790 | lncRNA | downstream | 114386 | 52640535 ~ 52640734 (+) | True | G157354 |
| LOC118944140 | mRNA | upstream | 1067934 | 51429454 ~ 51429572 (+) | True | LOC118944140 |
| XR_005039449.1 | mRNA | upstream | 1075053 | 51422337 ~ 51422453 (+) | True | LOC118944142 |
| LOC118944199 | mRNA | upstream | 1075477 | 51421856 ~ 51422029 (+) | True | LOC118944199 |
| XM_021617652.2 | mRNA | upstream | 1080352 | 51413140 ~ 51417154 (+) | False | rl28 |
| XM_021617626.2 | mRNA | upstream | 1080405 | 51412687 ~ 51417101 (+) | False | rl28 |
| XM_021564725.2 | mRNA | downstream | 377042 | 52903191 ~ 53018812 (+) | True | cspg4 |
| XM_021564755.2 | mRNA | downstream | 607348 | 53133497 ~ 53167781 (+) | False | snupn |
| XM_021564748.2 | mRNA | downstream | 607564 | 53133713 ~ 53167781 (+) | True | snupn |
| XM_021564770.2 | mRNA | downstream | 678932 | 53205081 ~ 53249227 (+) | False | ptpn9a |
| XM_021564780.2 | mRNA | downstream | 679737 | 53205886 ~ 53249227 (+) | True | ptpn9a |
| TU178397 | other | upstream | 673324 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 1076384 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 1080388 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 1175073 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 1330332 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 1495459 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 1826834 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 2202147 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 3419994 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 3718895 | 56245044 ~ 56252598 (+) | True | G161687 |
