Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU179930 |
| length | 258 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G157492 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52735925 ~ 52736182 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU179868 | lncRNA | upstream | 43791 | 52691774 ~ 52692134 (+) | True | G157430 |
| TU179856 | lncRNA | upstream | 51827 | 52683872 ~ 52684098 (+) | True | G157418 |
| TU179806 | lncRNA | upstream | 86503 | 52649177 ~ 52649422 (+) | True | G157370 |
| TU179793 | lncRNA | upstream | 94609 | 52641094 ~ 52641316 (+) | True | G157357 |
| TU179790 | lncRNA | upstream | 95191 | 52640535 ~ 52640734 (+) | True | G157354 |
| TU179933 | lncRNA | downstream | 2899 | 52739081 ~ 52739422 (+) | True | G157495 |
| TU179937 | lncRNA | downstream | 5362 | 52741544 ~ 52741760 (+) | True | G157499 |
| TU179938 | lncRNA | downstream | 6318 | 52742500 ~ 52785585 (+) | True | G157500 |
| TU180171 | lncRNA | downstream | 356651 | 53092833 ~ 53093097 (+) | True | G157726 |
| TU180440 | lncRNA | downstream | 384987 | 53121169 ~ 53129021 (+) | True | G157986 |
| LOC118944140 | mRNA | upstream | 1306353 | 51429454 ~ 51429572 (+) | True | LOC118944140 |
| XR_005039449.1 | mRNA | upstream | 1313472 | 51422337 ~ 51422453 (+) | True | LOC118944142 |
| LOC118944199 | mRNA | upstream | 1313896 | 51421856 ~ 51422029 (+) | True | LOC118944199 |
| XM_021617652.2 | mRNA | upstream | 1318771 | 51413140 ~ 51417154 (+) | False | rl28 |
| XM_021617626.2 | mRNA | upstream | 1318824 | 51412687 ~ 51417101 (+) | False | rl28 |
| XM_021564725.2 | mRNA | downstream | 167009 | 52903191 ~ 53018812 (+) | True | cspg4 |
| XM_021564755.2 | mRNA | downstream | 397315 | 53133497 ~ 53167781 (+) | False | snupn |
| XM_021564748.2 | mRNA | downstream | 397531 | 53133713 ~ 53167781 (+) | True | snupn |
| XM_021564770.2 | mRNA | downstream | 468899 | 53205081 ~ 53249227 (+) | False | ptpn9a |
| XM_021564780.2 | mRNA | downstream | 469704 | 53205886 ~ 53249227 (+) | True | ptpn9a |
| TU178397 | other | upstream | 911743 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 1314803 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 1318807 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 1413492 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 1568751 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 1285426 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 1616801 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 1992114 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 3209961 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 3508862 | 56245044 ~ 56252598 (+) | True | G161687 |
