Item | Value |
---|---|
RNA id | TU180516 |
length | 269 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 1 |
gene id | G158057 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 53170972 ~ 53171240 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU180505 | lncRNA | downstream | 5736 | 53159338 ~ 53165236 (-) | True | G158048 |
TU180433 | lncRNA | downstream | 54477 | 53116259 ~ 53116495 (-) | True | G157979 |
TU180348 | lncRNA | downstream | 172305 | 52997999 ~ 52998667 (-) | True | G157898 |
TU180361 | lncRNA | downstream | 174746 | 52995944 ~ 52996226 (-) | True | G157911 |
TU180265 | lncRNA | downstream | 267134 | 52853690 ~ 52903838 (-) | True | G157816 |
TU180723 | lncRNA | upstream | 4166 | 53175406 ~ 53264124 (-) | True | G158241 |
TU180797 | lncRNA | upstream | 74493 | 53245733 ~ 53246513 (-) | True | G158306 |
TU180801 | lncRNA | upstream | 81617 | 53252857 ~ 53269371 (-) | True | G158308 |
TU180892 | lncRNA | upstream | 225422 | 53396662 ~ 53396931 (-) | True | G158393 |
TU180782 | lncRNA | upstream | 267675 | 53438915 ~ 53439271 (-) | True | G158291 |
XM_021564736.2 | mRNA | downstream | 58425 | 53073293 ~ 53112547 (-) | False | snx33 |
XR_005034526.1 | mRNA | downstream | 390513 | 52779596 ~ 52780459 (-) | True | LOC118937283 |
XM_021564711.2 | mRNA | downstream | 1081425 | 51822291 ~ 52089547 (-) | True | lingo1a |
XM_021564707.2 | mRNA | downstream | 1294963 | 51822291 ~ 51876009 (-) | False | lingo1a |
XM_021564629.2 | mRNA | downstream | 1941643 | 51180770 ~ 51229329 (-) | True | LOC110491276 |
XR_005037026.1 | mRNA | upstream | 11358 | 53182598 ~ 53185801 (-) | False | LOC118940482 |
XR_005037027.1 | mRNA | upstream | 11358 | 53182598 ~ 53188868 (-) | True | LOC118940482 |
XM_021564834.2 | mRNA | upstream | 140781 | 53312021 ~ 53343562 (-) | True | crabp1a |
XM_021564848.2 | mRNA | upstream | 201992 | 53373232 ~ 53396107 (-) | False | slc25a44a |
XM_036950373.1 | mRNA | upstream | 201992 | 53373232 ~ 53396108 (-) | True | slc25a44a |
TU180370 | other | downstream | 58681 | 53032902 ~ 53112291 (-) | True | snx33 |
TU177982 | other | downstream | 1753862 | 51412269 ~ 51417110 (-) | False | G155610 |
TU177680 | other | downstream | 2121092 | 51039870 ~ 51049880 (-) | False | LOC110491241 |
TU177681 | other | downstream | 2121092 | 51039870 ~ 51049880 (-) | True | LOC110491241 |
TU177629 | other | downstream | 2199037 | 50971076 ~ 50971935 (-) | True | G155281 |
TU181650 | other | upstream | 685446 | 53856686 ~ 53857552 (-) | True | G159120 |
TU181691 | other | upstream | 798203 | 53969443 ~ 53971339 (-) | False | cd59 |
TU181692 | other | upstream | 798203 | 53969443 ~ 53971339 (-) | True | cd59 |
TU181798 | other | upstream | 1086186 | 54257426 ~ 54268353 (-) | True | ambra1b |
TU182463 | other | upstream | 1557059 | 54728299 ~ 54728860 (-) | True | G159890 |