Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU180991 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G158492 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53544529 ~ 53544750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU180989 | lncRNA | upstream | 543 | 53543361 ~ 53543986 (+) | True | G158490 |
| TU180697 | lncRNA | upstream | 42651 | 53501582 ~ 53501878 (+) | True | G158218 |
| TU180691 | lncRNA | upstream | 47264 | 53496857 ~ 53497265 (+) | True | G158212 |
| TU180670 | lncRNA | upstream | 98784 | 53444044 ~ 53445745 (+) | True | psma4 |
| TU180660 | lncRNA | upstream | 131785 | 53412520 ~ 53412744 (+) | True | G158182 |
| TU180994 | lncRNA | downstream | 821 | 53545571 ~ 53545773 (+) | True | G158495 |
| TU180995 | lncRNA | downstream | 1121 | 53545871 ~ 53546095 (+) | True | G158496 |
| TU181013 | lncRNA | downstream | 9608 | 53554358 ~ 53554623 (+) | True | G158514 |
| TU181115 | lncRNA | downstream | 132219 | 53676969 ~ 53677266 (+) | True | G158607 |
| TU181089 | lncRNA | downstream | 137892 | 53682642 ~ 53682859 (+) | True | G158584 |
| XM_021564892.2 | mRNA | upstream | 78213 | 53444048 ~ 53466316 (+) | False | psma4 |
| XM_021564901.2 | mRNA | upstream | 78213 | 53449650 ~ 53466316 (+) | False | psma4 |
| XM_021564909.2 | mRNA | upstream | 78213 | 53450258 ~ 53466316 (+) | False | psma4 |
| XM_021564872.2 | mRNA | upstream | 105760 | 53416113 ~ 53438769 (+) | False | ireb2 |
| XM_021564940.2 | mRNA | downstream | 92555 | 53637305 ~ 53651854 (+) | False | rbpms2a |
| XM_036950411.1 | mRNA | downstream | 92555 | 53637305 ~ 53651854 (+) | False | rbpms2a |
| XR_005037045.1 | mRNA | downstream | 92555 | 53637305 ~ 53651854 (+) | False | rbpms2a |
| XR_005037046.1 | mRNA | downstream | 92555 | 53637305 ~ 53651854 (+) | True | rbpms2a |
| XM_021565010.2 | mRNA | downstream | 155068 | 53699818 ~ 53794946 (+) | False | LOC110491473 |
| TU178397 | other | upstream | 1720347 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 2123407 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 2127411 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177860 | other | upstream | 2222096 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177155 | other | upstream | 2377355 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU181296 | other | downstream | 476858 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU181970 | other | downstream | 808233 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU182462 | other | downstream | 1183546 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 2401393 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 2700294 | 56245044 ~ 56252598 (+) | True | G161687 |
