Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU181475 |
| length | 474 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G158952 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53566391 ~ 53626084 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181022 | lncRNA | downstream | 5240 | 53560850 ~ 53561151 (-) | True | G158523 |
| TU181010 | lncRNA | downstream | 12632 | 53553289 ~ 53553759 (-) | True | G158511 |
| TU181008 | lncRNA | downstream | 13240 | 53552920 ~ 53553151 (-) | True | G158509 |
| TU180998 | lncRNA | downstream | 19624 | 53546513 ~ 53546767 (-) | True | G158499 |
| TU180996 | lncRNA | downstream | 20084 | 53545964 ~ 53546307 (-) | True | G158497 |
| TU181543 | lncRNA | upstream | 64460 | 53690544 ~ 53690992 (-) | True | G159018 |
| TU181627 | lncRNA | upstream | 204883 | 53830967 ~ 53875721 (-) | True | G159097 |
| TU181652 | lncRNA | upstream | 236575 | 53862659 ~ 53864812 (-) | True | G159122 |
| TU181668 | lncRNA | upstream | 258054 | 53884138 ~ 53885912 (-) | True | G159137 |
| TU181669 | lncRNA | upstream | 262586 | 53888670 ~ 53889204 (-) | True | G159138 |
| XM_036950407.1 | mRNA | downstream | 75986 | 53468272 ~ 53490405 (-) | True | oaz2a |
| XM_036950373.1 | mRNA | downstream | 170283 | 53373232 ~ 53396108 (-) | True | slc25a44a |
| XM_021564848.2 | mRNA | downstream | 170284 | 53373232 ~ 53396107 (-) | False | slc25a44a |
| XM_021564834.2 | mRNA | downstream | 222829 | 53312021 ~ 53343562 (-) | True | crabp1a |
| XR_005037027.1 | mRNA | downstream | 377523 | 53182598 ~ 53188868 (-) | True | LOC118940482 |
| XM_021565100.2 | mRNA | upstream | 197688 | 53823772 ~ 53851668 (-) | False | sv2 |
| XM_021565090.2 | mRNA | upstream | 207939 | 53834023 ~ 53851668 (-) | True | sv2 |
| XM_021565111.2 | mRNA | upstream | 216582 | 53842666 ~ 53845012 (-) | False | LOC110491563 |
| XR_005037055.1 | mRNA | upstream | 216582 | 53842666 ~ 53845012 (-) | True | LOC110491563 |
| XM_021565135.2 | mRNA | upstream | 264825 | 53890909 ~ 53893848 (-) | True | ppib |
| TU180370 | other | downstream | 454100 | 53032902 ~ 53112291 (-) | True | snx33 |
| TU177982 | other | downstream | 2149281 | 51412269 ~ 51417110 (-) | False | G155610 |
| TU177680 | other | downstream | 2516511 | 51039870 ~ 51049880 (-) | False | LOC110491241 |
| TU177681 | other | downstream | 2516511 | 51039870 ~ 51049880 (-) | True | LOC110491241 |
| TU177629 | other | downstream | 2594456 | 50971076 ~ 50971935 (-) | True | G155281 |
| TU181650 | other | upstream | 230602 | 53856686 ~ 53857552 (-) | True | G159120 |
| TU181691 | other | upstream | 343359 | 53969443 ~ 53971339 (-) | False | cd59 |
| TU181692 | other | upstream | 343359 | 53969443 ~ 53971339 (-) | True | cd59 |
| TU181798 | other | upstream | 631342 | 54257426 ~ 54268353 (-) | True | ambra1b |
| TU182463 | other | upstream | 1102215 | 54728299 ~ 54728860 (-) | True | G159890 |
