Item | Value |
---|---|
RNA id | TCONS_00028368 |
length | 1431 |
RNA type | mRNA |
GC content | 0.50 |
exon number | 10 |
gene id | XLOC_014276 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007130.7 |
NCBI id | CM002903.2 |
chromosome length | 48449771 |
location | 43004408 ~ 43016395 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | description |
---|---|
ZDB-GENE-040426-978 | Predicted to be located in viral nucleocapsid. Orthologous to human SNRNP40 (small nuclear ribonucleoprotein U5 subunit 40). |
ensembl_id | ENSDART00000038230 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00028359 | lncRNA | upstream | 206002 | 42793365 ~ 42798406 (+) | True | XLOC_014270 |
TCONS_00028357 | lncRNA | upstream | 230829 | 42766707 ~ 42773579 (+) | False | XLOC_014270 |
TCONS_00028356 | lncRNA | upstream | 239642 | 42761946 ~ 42764766 (+) | False | XLOC_014270 |
TCONS_00028347 | lncRNA | upstream | 401119 | 42560956 ~ 42603289 (+) | True | XLOC_014266 |
TCONS_00028372 | lncRNA | downstream | 8292 | 43024687 ~ 43027483 (+) | True | XLOC_014277 |
TCONS_00028377 | lncRNA | downstream | 56298 | 43072693 ~ 43079678 (+) | False | XLOC_014278 |
TCONS_00030037 | lncRNA | downstream | 56298 | 43072693 ~ 43079838 (+) | False | XLOC_014278 |
TCONS_00028378 | lncRNA | downstream | 58248 | 43074643 ~ 43079838 (+) | True | XLOC_014278 |
TCONS_00030038 | lncRNA | downstream | 234158 | 43250553 ~ 43251194 (+) | True | XLOC_014282 |
TCONS_00028367 | mRNA | upstream | 11102 | 42983613 ~ 42993306 (+) | True | XLOC_014275 |
TCONS_00028366 | mRNA | upstream | 11174 | 42955280 ~ 42993234 (+) | False | XLOC_014275 |
TCONS_00028363 | mRNA | upstream | 87182 | 42886413 ~ 42917226 (+) | False | XLOC_014273 |
TCONS_00028364 | mRNA | upstream | 87635 | 42898239 ~ 42916773 (+) | True | XLOC_014273 |
TCONS_00028362 | mRNA | upstream | 129223 | 42847306 ~ 42875185 (+) | True | XLOC_014272 |
TCONS_00028369 | mRNA | downstream | 1233 | 43017628 ~ 43035187 (+) | False | XLOC_014277 |
TCONS_00028370 | mRNA | downstream | 1377 | 43017772 ~ 43031383 (+) | False | XLOC_014277 |
TCONS_00028371 | mRNA | downstream | 1536 | 43017931 ~ 43026832 (+) | False | XLOC_014277 |
TCONS_00028373 | mRNA | downstream | 21262 | 43037657 ~ 43089455 (+) | False | XLOC_014278 |
TCONS_00028374 | mRNA | downstream | 21262 | 43037657 ~ 43090728 (+) | False | XLOC_014278 |
TCONS_00028365 | other | upstream | 88867 | 42915419 ~ 42915541 (+) | True | XLOC_014274 |
TCONS_00028353 | other | upstream | 269123 | 42732688 ~ 42735285 (+) | False | XLOC_014270 |
TCONS_00028342 | other | upstream | 666977 | 42337317 ~ 42337431 (+) | True | XLOC_014261 |
TCONS_00028333 | other | upstream | 815304 | 42188990 ~ 42189104 (+) | True | XLOC_014257 |
TCONS_00028303 | other | upstream | 2045792 | 40958500 ~ 40958616 (+) | True | XLOC_014238 |
TCONS_00028379 | other | downstream | 61349 | 43077744 ~ 43077879 (+) | True | XLOC_014279 |
TCONS_00028380 | other | downstream | 64530 | 43080925 ~ 43081060 (+) | True | XLOC_014280 |
TCONS_00028401 | other | downstream | 423006 | 43439401 ~ 43451947 (+) | False | XLOC_014288 |
TCONS_00028411 | other | downstream | 648996 | 43665391 ~ 43665511 (+) | True | XLOC_014295 |
TCONS_00028433 | other | downstream | 993078 | 44009473 ~ 44032164 (+) | False | XLOC_014312 |