Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU182202 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G159637 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 54535889 ~ 54536104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182173 | lncRNA | downstream | 11344 | 54510925 ~ 54524545 (-) | False | LOC110491804 |
| TU182174 | lncRNA | downstream | 11936 | 54510925 ~ 54523953 (-) | True | LOC110491804 |
| TU182175 | lncRNA | downstream | 28226 | 54506926 ~ 54507663 (-) | True | G159610 |
| TU182169 | lncRNA | downstream | 45074 | 54490561 ~ 54490815 (-) | True | G159605 |
| TU182168 | lncRNA | downstream | 46902 | 54488633 ~ 54488987 (-) | True | G159604 |
| TU182249 | lncRNA | upstream | 49438 | 54585542 ~ 54585840 (-) | True | G159684 |
| TU182252 | lncRNA | upstream | 51816 | 54587920 ~ 54588221 (-) | True | G159687 |
| TU182254 | lncRNA | upstream | 53372 | 54589476 ~ 54589811 (-) | True | G159689 |
| TU182261 | lncRNA | upstream | 57717 | 54593821 ~ 54594150 (-) | True | G159696 |
| TU182473 | lncRNA | upstream | 195685 | 54731789 ~ 54732120 (-) | True | G159895 |
| XM_036950753.1 | mRNA | downstream | 10889 | 54521142 ~ 54525000 (-) | False | LOC110491804 |
| XM_021565541.2 | mRNA | downstream | 73052 | 54458665 ~ 54462837 (-) | True | fem1b |
| XM_021565490.2 | mRNA | downstream | 196054 | 54303365 ~ 54339835 (-) | True | coro2bb |
| XM_021565440.2 | mRNA | downstream | 236943 | 54281716 ~ 54298946 (-) | False | nox5 |
| XM_036950717.1 | mRNA | downstream | 267495 | 54213602 ~ 54268394 (-) | False | ambra1b |
| XM_021565587.2 | mRNA | upstream | 311488 | 54847592 ~ 54852144 (-) | False | ciao2a |
| XM_021565648.2 | mRNA | upstream | 442813 | 54978917 ~ 55001034 (-) | True | si:ch211-284k5.2 |
| XR_002468918.2 | mRNA | upstream | 1139945 | 55676049 ~ 55698528 (-) | False | LOC110491875 |
| XM_021565703.2 | mRNA | upstream | 1291652 | 55827756 ~ 55840888 (-) | True | mpi |
| XM_021565812.2 | mRNA | upstream | 1399545 | 55935649 ~ 56006744 (-) | False | LOC110491905 |
| TU181798 | other | downstream | 267536 | 54257426 ~ 54268353 (-) | True | ambra1b |
| TU181691 | other | downstream | 564550 | 53969443 ~ 53971339 (-) | False | cd59 |
| TU181692 | other | downstream | 564550 | 53969443 ~ 53971339 (-) | True | cd59 |
| TU181650 | other | downstream | 678337 | 53856686 ~ 53857552 (-) | True | G159120 |
| TU180370 | other | downstream | 1423598 | 53032902 ~ 53112291 (-) | True | snx33 |
| TU182463 | other | upstream | 192195 | 54728299 ~ 54728860 (-) | True | G159890 |
| TU184134 | other | upstream | 1399567 | 55935671 ~ 55943565 (-) | False | LOC110491905 |
| TU184572 | other | upstream | 1765251 | 56301355 ~ 56302095 (-) | True | G161823 |
| TU185501 | other | upstream | 2291192 | 56827296 ~ 56830576 (-) | False | G162657 |
| TU185596 | other | upstream | 2578463 | 57114567 ~ 57117150 (-) | True | G162745 |
