RNA id: TU184460



Basic Information


Item Value
RNA id TU184460
length 232
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G161722
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56296851 ~ 56297082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTCGCAGTGTGTTTTTTGATCGTCTACACCTGTCTAAAATATGTGAGCACAATCAGGACAAATGTTAGCAGGTATAAATGGGGCTCGGGATTCTTATCTCAATGGGACTCACCTTGACTATCCTTTGGACAAGGCATGGATGCTCAAAAGGCAAAACAATGCAAAAATATTAATAAGCACAGCACAAGCAGGAGTTCTGTGCATGTTGCCTTGTTGTTTACTCCCATTATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU184454 lncRNA upstream 7568 56288952 ~ 56289283 (+) True G161716
TU184453 lncRNA upstream 8669 56287815 ~ 56288182 (+) True G161715
TU184397 lncRNA upstream 95231 56200522 ~ 56201620 (+) True G161668
TU184396 lncRNA upstream 96341 56200106 ~ 56200510 (+) True G161667
TU184389 lncRNA upstream 99415 56196310 ~ 56197436 (+) True G161663
TU184462 lncRNA downstream 2002 56299084 ~ 56299404 (+) True G161724
TU184570 lncRNA downstream 3789 56300871 ~ 56301339 (+) True G161821
TU184611 lncRNA downstream 35890 56332972 ~ 56333616 (+) True G161857
TU184612 lncRNA downstream 37406 56334488 ~ 56334912 (+) True G161858
TU184616 lncRNA downstream 38547 56335629 ~ 56335917 (+) True G161862
XM_036951018.1 mRNA upstream 67774 56207828 ~ 56229077 (+) False LOC110492043
XM_036951017.1 mRNA upstream 67774 56210763 ~ 56229077 (+) True LOC110492043
XM_021565950.2 mRNA upstream 125887 56146461 ~ 56170964 (+) False LOC110491996
XM_021566172.2 mRNA downstream 189615 56486697 ~ 56497109 (+) False LOC110492132
XM_021566180.2 mRNA downstream 189619 56486701 ~ 56497109 (+) True LOC110492132
XM_036951024.1 mRNA downstream 210554 56507636 ~ 56518535 (+) False LOC110492152
XM_021566210.2 mRNA downstream 210565 56507647 ~ 56518535 (+) False LOC110492152
XM_036951022.1 mRNA downstream 212503 56509585 ~ 56518535 (+) False LOC110492152
TU184425 other upstream 44253 56245044 ~ 56252598 (+) True G161687
TU183214 other upstream 349606 55946143 ~ 55947245 (+) True G160569
TU182462 other upstream 1567991 54728296 ~ 54728860 (+) True G159889
TU181970 other upstream 1943463 54352983 ~ 54353388 (+) True G159415
TU181296 other upstream 2274947 54021608 ~ 54021904 (+) True G158778
TU184934 other downstream 751232 57048314 ~ 57053642 (+) True G162130
TU186506 other downstream 1631068 57928150 ~ 57931991 (+) True G163513
TU186698 other downstream 1918595 58215677 ~ 58216383 (+) True G163660
TU189317 other downstream 3648626 59945708 ~ 59953165 (+) True G166131
TU190136 other downstream 4218550 60515632 ~ 60515880 (+) True G166878

Expression Profile