Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028392 |
| length | 836 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | XLOC_014286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 43341115 ~ 43357457 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:1901031 | regulation of response to reactive oxygen species | biological_process |
| GO:1904262 | negative regulation of TORC1 signaling | biological_process |
| GO:0016239 | positive regulation of macroautophagy | biological_process |
| GO:1990253 | cellular response to leucine starvation | biological_process |
| GO:0071230 | cellular response to amino acid stimulus | biological_process |
| GO:0071233 | cellular response to leucine | biological_process |
| GO:0061700 | GATOR2 complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0031932 | TORC2 complex | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | molecular_function |
| GO:0070728 | leucine binding | molecular_function |
| id | description |
|---|---|
| ko04150 | mTOR signaling pathway |
| ko04115 | p53 signaling pathway |
| ko04211 | Longevity regulating pathway |
| id | description |
|---|---|
| ZDB-GENE-070108-1 | Predicted to enable leucine binding activity and oxidoreductase activity, acting on peroxide as acceptor. Predicted to be involved in several processes, including cellular response to leucine; cellular response to leucine starvation; and negative regulation of TORC1 signaling. Predicted to act upstream of or within regulation of response to reactive oxygen species. Predicted to be located in cytoplasm and nucleus. Orthologous to human SESN2 (sestrin 2). |
| ensembl_id | ENSDART00000134815 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030038 | lncRNA | upstream | 90230 | 43250553 ~ 43251194 (+) | True | XLOC_014282 |
| TCONS_00030037 | lncRNA | upstream | 261586 | 43072693 ~ 43079838 (+) | False | XLOC_014278 |
| TCONS_00028378 | lncRNA | upstream | 261586 | 43074643 ~ 43079838 (+) | True | XLOC_014278 |
| TCONS_00028377 | lncRNA | upstream | 261746 | 43072693 ~ 43079678 (+) | False | XLOC_014278 |
| TCONS_00028372 | lncRNA | upstream | 313941 | 43024687 ~ 43027483 (+) | True | XLOC_014277 |
| TCONS_00028400 | lncRNA | downstream | 71184 | 43420765 ~ 43424145 (+) | True | XLOC_014287 |
| TCONS_00030040 | lncRNA | downstream | 197066 | 43546647 ~ 43549011 (+) | False | XLOC_014291 |
| TCONS_00030039 | lncRNA | downstream | 197066 | 43546647 ~ 43549011 (+) | True | XLOC_014291 |
| TCONS_00028407 | lncRNA | downstream | 243258 | 43592839 ~ 43599344 (+) | True | XLOC_014293 |
| TCONS_00028415 | lncRNA | downstream | 366389 | 43715970 ~ 43724855 (+) | False | XLOC_014297 |
| TCONS_00028388 | mRNA | upstream | 3144 | 43314700 ~ 43338280 (+) | False | XLOC_014285 |
| TCONS_00028389 | mRNA | upstream | 9805 | 43314738 ~ 43331619 (+) | True | XLOC_014285 |
| TCONS_00028387 | mRNA | upstream | 31828 | 43297546 ~ 43309596 (+) | True | XLOC_014284 |
| TCONS_00028386 | mRNA | upstream | 69092 | 43256986 ~ 43272332 (+) | True | XLOC_014283 |
| TCONS_00028383 | mRNA | upstream | 203684 | 43119698 ~ 43137740 (+) | False | XLOC_014281 |
| TCONS_00028393 | mRNA | downstream | 9494 | 43359075 ~ 43432415 (+) | False | XLOC_014287 |
| TCONS_00028394 | mRNA | downstream | 9542 | 43359123 ~ 43406238 (+) | False | XLOC_014287 |
| TCONS_00028395 | mRNA | downstream | 9546 | 43359127 ~ 43432413 (+) | False | XLOC_014287 |
| TCONS_00028396 | mRNA | downstream | 9548 | 43359129 ~ 43432415 (+) | False | XLOC_014287 |
| TCONS_00028397 | mRNA | downstream | 9556 | 43359137 ~ 43432413 (+) | False | XLOC_014287 |
| TCONS_00028380 | other | upstream | 260364 | 43080925 ~ 43081060 (+) | True | XLOC_014280 |
| TCONS_00028379 | other | upstream | 263545 | 43077744 ~ 43077879 (+) | True | XLOC_014279 |
| TCONS_00028365 | other | upstream | 425883 | 42915419 ~ 42915541 (+) | True | XLOC_014274 |
| TCONS_00028353 | other | upstream | 606139 | 42732688 ~ 42735285 (+) | False | XLOC_014270 |
| TCONS_00028342 | other | upstream | 1003993 | 42337317 ~ 42337431 (+) | True | XLOC_014261 |
| TCONS_00028401 | other | downstream | 89820 | 43439401 ~ 43451947 (+) | False | XLOC_014288 |
| TCONS_00028411 | other | downstream | 315810 | 43665391 ~ 43665511 (+) | True | XLOC_014295 |
| TCONS_00028433 | other | downstream | 659892 | 44009473 ~ 44032164 (+) | False | XLOC_014312 |
| TCONS_00028436 | other | downstream | 2159284 | 45508865 ~ 45508981 (+) | True | XLOC_014316 |
| TCONS_00028450 | other | downstream | 2894039 | 46243620 ~ 46280931 (+) | False | XLOC_014327 |
