Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU189453 |
| length | 585 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G166259 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 60067305 ~ 60127600 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189333 | lncRNA | upstream | 144422 | 59920128 ~ 59922883 (+) | True | LOC110501704 |
| TU189308 | lncRNA | upstream | 194484 | 59872367 ~ 59872821 (+) | True | G166122 |
| TU189307 | lncRNA | upstream | 196207 | 59870810 ~ 59871098 (+) | True | G166121 |
| TU189306 | lncRNA | upstream | 196835 | 59869996 ~ 59870470 (+) | True | G166120 |
| TU189305 | lncRNA | upstream | 199128 | 59867904 ~ 59868177 (+) | True | G166119 |
| TU189566 | lncRNA | downstream | 133978 | 60261578 ~ 60261804 (+) | True | G166370 |
| TU189562 | lncRNA | downstream | 157793 | 60285393 ~ 60288852 (+) | True | LOC110501735 |
| TU189591 | lncRNA | downstream | 168151 | 60295751 ~ 60296886 (+) | True | G166381 |
| TU189647 | lncRNA | downstream | 252174 | 60379774 ~ 60380051 (+) | True | G166431 |
| TU189649 | lncRNA | downstream | 255296 | 60382896 ~ 60383104 (+) | True | G166433 |
| XM_036952045.1 | mRNA | upstream | 89984 | 59969706 ~ 59977321 (+) | True | iqub |
| XM_036952003.1 | mRNA | upstream | 144582 | 59900130 ~ 59922723 (+) | False | LOC110501704 |
| XM_036952009.1 | mRNA | upstream | 144582 | 59900130 ~ 59922723 (+) | False | LOC110501704 |
| XM_021567236.2 | mRNA | upstream | 285448 | 59774163 ~ 59781857 (+) | False | LOC110492759 |
| XM_021567244.2 | mRNA | upstream | 285448 | 59774163 ~ 59781857 (+) | True | LOC110492759 |
| XM_021567308.2 | mRNA | downstream | 135099 | 60262699 ~ 60267392 (+) | True | LOC110492825 |
| LOC110501735 | mRNA | downstream | 146784 | 60274384 ~ 60287624 (+) | False | LOC110501735 |
| XM_021567324.2 | mRNA | downstream | 271276 | 60398876 ~ 60406820 (+) | True | LOC110492846 |
| XM_036934029.1 | mRNA | downstream | 500338 | 60627938 ~ 60639516 (+) | True | syt8 |
| XM_021567377.2 | mRNA | downstream | 527001 | 60654601 ~ 60666601 (+) | True | LOC110492948 |
| TU189317 | other | upstream | 114140 | 59945708 ~ 59953165 (+) | True | G166131 |
| TU186698 | other | upstream | 1850922 | 58215677 ~ 58216383 (+) | True | G163660 |
| TU186506 | other | upstream | 2135314 | 57928150 ~ 57931991 (+) | True | G163513 |
| TU184934 | other | upstream | 3013663 | 57048314 ~ 57053642 (+) | True | G162130 |
| TU184425 | other | upstream | 3814707 | 56245044 ~ 56252598 (+) | True | G161687 |
| TU190136 | other | downstream | 388032 | 60515632 ~ 60515880 (+) | True | G166878 |
| TU190389 | other | downstream | 723832 | 60851432 ~ 60866455 (+) | False | LOC110493059 |
| TU190393 | other | downstream | 723832 | 60851432 ~ 60866455 (+) | True | LOC110493059 |
| TU190578 | other | downstream | 934993 | 61062593 ~ 61074591 (+) | True | G167288 |
| TU190618 | other | downstream | 1104596 | 61232196 ~ 61232545 (+) | True | G167325 |
