RNA id: TU191049



Basic Information


Item Value
RNA id TU191049
length 319
RNA type TUCP
GC content 0.50
exon number 1
gene id G167723
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 60678723 ~ 60679041 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


accatgctgtctgtgtgggtggaccatttcagtttgtccgtgatgtgtacgccgaggaacttaaaacgtttcacgttctccactactgtctcgtcgatgtggatagggggggtgctccctctgctgtttcctgaagtccacgatcatctcctttgttttgttgatgttgagtgtgaggttattttcctgacaccacactccgagagccctcacctcctccctgtaggccgtctcattgttgttggtaatcaagcctaccactatagtgtcgtctgcaaacttgatgaatgagttggaggcatgcatagccatgcagtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191045 lncRNA downstream 7264 60671158 ~ 60671459 (-) True G167719
TU191035 lncRNA downstream 11597 60664955 ~ 60667126 (-) True G167709
TU190274 lncRNA downstream 67208 60611285 ~ 60611515 (-) True G167014
TU190273 lncRNA downstream 67524 60610965 ~ 60611199 (-) True G167013
TU190268 lncRNA downstream 71525 60606976 ~ 60607198 (-) True G167008
TU191031 lncRNA upstream 16222 60695263 ~ 60740351 (-) False G167706
TU191172 lncRNA upstream 250611 60929652 ~ 60929867 (-) True G167842
TU191174 lncRNA upstream 256431 60935472 ~ 60935735 (-) True G167844
TU191175 lncRNA upstream 257933 60936974 ~ 60937229 (-) True G167845
TU191258 lncRNA upstream 376803 61055844 ~ 61097591 (-) True G167922
XM_021567373.2 mRNA downstream 51250 60625142 ~ 60627473 (-) True LOC110492911
XM_021567361.2 mRNA downstream 118977 60537619 ~ 60559746 (-) False LOC110492890
XM_021567353.2 mRNA downstream 208165 60448878 ~ 60470558 (-) True ppp1r3ab
XM_021567342.2 mRNA downstream 223437 60448878 ~ 60455286 (-) False ppp1r3ab
XM_021567347.2 mRNA downstream 223437 60448878 ~ 60455286 (-) False ppp1r3ab
XM_021567382.2 mRNA upstream 156116 60835157 ~ 60850501 (-) False LOC110493006
XM_021567381.2 mRNA upstream 156116 60835157 ~ 60850563 (-) True LOC110493006
XM_021567392.2 mRNA upstream 202355 60881396 ~ 60883242 (-) True LOC110493125
XM_021567393.2 mRNA upstream 209752 60888793 ~ 60899520 (-) True zgc:172145
XM_036952293.1 mRNA upstream 365212 61044253 ~ 61059973 (-) True LOC110493151
TU190177 other downstream 129544 60540189 ~ 60549179 (-) True LOC110492890
TU190135 other downstream 163201 60515226 ~ 60515522 (-) True G166877
TU190051 other downstream 271915 60402348 ~ 60406808 (-) True G166794
TU189774 other downstream 758393 59919878 ~ 59920330 (-) True G166541
TU189225 other downstream 848708 59828076 ~ 59830015 (-) True LOC110492782
TU191030 other upstream 56930 60735971 ~ 60740351 (-) True G167706
TU191197 other upstream 295721 60974762 ~ 60975021 (-) True G167866
TU191365 other upstream 575471 61254512 ~ 61256015 (-) True G168021
TU191382 other upstream 612098 61291139 ~ 61300092 (-) True LOC110493186
TU191442 other upstream 811393 61490434 ~ 61491671 (-) True G168078

Expression Profile