RNA id: TU191386


Basic Information

Item Value
RNA id TU191386
length 453
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G168033
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61268566 ~ 61269018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AAATACAATCTAATTAACAAATGTTTGCATAACCAAAGACATGACAACTGGCTCCAACATTGTATTTAGCTAGCTATAAGACTTTCATATTGGCAGTAAGGTCAGTGAGAATAACAATAGACAATAGTTATTGTTGGTAGTTTAGGGATACATATAGTGAAGGATCATGAATGTTAAATTTGTTAGAAATGTTAGATTTGTTCACAGTGGGAATTTTGAAAGAGGGGGATTAGAACCCCTAAAGTAATAGTGGTAAGAAAGATCATAGTTTCAGATTCAGGTCTAGGGGGTTAATAACTTTTTGTGGATACTACTATTCACACTATGTGGATTATAAACATGTACAGACATAGAGAACTATCACATCAAGAAGGTGTAACAGTGATGAATGGCTATTCAATGTACAACAGTCGTCATCTGTAGCAAGCAATACGTATTAAATATACATCCATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191368 lncRNA downstream 8623 61259069 ~ 61259943 (-) True G168024
TU191351 lncRNA downstream 37974 61230353 ~ 61230592 (-) True G168009
TU191336 lncRNA downstream 72877 61195424 ~ 61195689 (-) True G167994
TU191276 lncRNA downstream 77009 61130321 ~ 61191557 (-) True LOC110493154
TU191279 lncRNA downstream 144818 61119831 ~ 61123748 (-) True G167938
TU191379 lncRNA upstream 21131 61290149 ~ 61294920 (-) False LOC110493186
TU191393 lncRNA upstream 38129 61307147 ~ 61361520 (-) True LOC118941125
TU191465 lncRNA upstream 147645 61416663 ~ 61416891 (-) True G168099
TU191474 lncRNA upstream 161695 61430713 ~ 61431023 (-) True G168108
TU191495 lncRNA upstream 226214 61495232 ~ 61495725 (-) True G168129
XM_021567439.2 mRNA downstream 17865 61233033 ~ 61250701 (-) False LOC110493155
XM_021567441.2 mRNA downstream 17867 61233033 ~ 61250699 (-) False LOC110493155
XM_036952339.1 mRNA downstream 18155 61233033 ~ 61250411 (-) False LOC110493155
XM_036952348.1 mRNA downstream 18155 61233037 ~ 61250411 (-) False LOC110493155
XM_036952354.1 mRNA downstream 18155 61233037 ~ 61250411 (-) False LOC110493155
XM_036952425.1 mRNA upstream 375 61269393 ~ 61282546 (-) True LOC110493207
XM_036952415.1 mRNA upstream 23069 61292087 ~ 61303291 (-) False LOC110493186
XM_036952417.1 mRNA upstream 23069 61292087 ~ 61303291 (-) False LOC110493186
XM_021567472.2 mRNA upstream 23069 61292087 ~ 61303506 (-) False LOC110493186
XR_002469105.2 mRNA upstream 23069 61292087 ~ 61303507 (-) False LOC110493186
TU191365 other downstream 12551 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 293545 60974762 ~ 60975021 (-) True G167866
TU191030 other downstream 528215 60735971 ~ 60740351 (-) True G167706
TU191049 other downstream 589525 60678723 ~ 60679041 (-) True G167723
TU190177 other downstream 719387 60540189 ~ 60549179 (-) True LOC110492890
TU191382 other upstream 22121 61291139 ~ 61300092 (-) True LOC110493186
TU191442 other upstream 221416 61490434 ~ 61491671 (-) True G168078
TU191507 other upstream 246219 61515237 ~ 61515656 (-) True G168141
TU193660 other upstream 1877756 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2690505 63959523 ~ 63963821 (-) True LOC110501772

Expression Profile