RNA id: TU191465


Basic Information

Item Value
RNA id TU191465
length 229
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G168099
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61416663 ~ 61416891 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aatctatggatttcacgactgggaatacagatgtgctTCTGGTCACAGGTATCTGTATCTGGAGTGatcaccatttgtctcatgcagtgTGACATCTCCTttgtatagagttgatcaggctgtcgaTTGGCTCCTGGgtggcttcctgccatccaggacctctataccaggcggtgtcagaggaaggccctaaaaattgtctaagactccagctaccctagtcatagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191393 lncRNA downstream 55143 61307147 ~ 61361520 (-) True LOC118941125
TU191379 lncRNA downstream 121743 61290149 ~ 61294920 (-) False LOC110493186
TU191386 lncRNA downstream 147645 61268566 ~ 61269018 (-) True G168033
TU191368 lncRNA downstream 156720 61259069 ~ 61259943 (-) True G168024
TU191351 lncRNA downstream 186071 61230353 ~ 61230592 (-) True G168009
TU191474 lncRNA upstream 13822 61430713 ~ 61431023 (-) True G168108
TU191495 lncRNA upstream 78341 61495232 ~ 61495725 (-) True G168129
TU191498 lncRNA upstream 81516 61498407 ~ 61498825 (-) True G168132
TU191499 lncRNA upstream 91243 61508134 ~ 61509299 (-) True G168133
TU191505 lncRNA upstream 96010 61512901 ~ 61513251 (-) True G168139
XM_021567516.2 mRNA downstream 1361 61370307 ~ 61415302 (-) True LOC110493250
XM_021567519.2 mRNA downstream 1465 61370307 ~ 61415198 (-) False LOC110493250
XR_002469111.2 mRNA downstream 34457 61380548 ~ 61382206 (-) True LOC110493274
XR_005039489.1 mRNA downstream 45462 61371088 ~ 61371201 (-) True LOC118944178
XM_021567503.2 mRNA downstream 76138 61316765 ~ 61340525 (-) True LOC110493232
LOC118936773 mRNA upstream 609 61417500 ~ 61428467 (-) True LOC118936773
XM_021567545.2 mRNA upstream 19324 61436215 ~ 61464085 (-) False LOC110493282
XM_021567552.2 mRNA upstream 19324 61436215 ~ 61464107 (-) False LOC110493282
XM_021567539.2 mRNA upstream 19324 61436215 ~ 61464302 (-) False LOC110493282
XM_021567560.2 mRNA upstream 19324 61436215 ~ 61464302 (-) False LOC110493282
TU191382 other downstream 116571 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 160648 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 441642 60974762 ~ 60975021 (-) True G167866
TU191030 other downstream 676312 60735971 ~ 60740351 (-) True G167706
TU191049 other downstream 737622 60678723 ~ 60679041 (-) True G167723
TU191442 other upstream 73543 61490434 ~ 61491671 (-) True G168078
TU191507 other upstream 98346 61515237 ~ 61515656 (-) True G168141
TU193660 other upstream 1729883 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2542632 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 2749072 64165963 ~ 64168398 (-) True tmem117

Expression Profile