RNA id: TU191474



Basic Information


Item Value
RNA id TU191474
length 311
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G168108
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61430713 ~ 61431023 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctctgtataaatgcacctgcactgtgatagtcttagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaaaccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191465 lncRNA downstream 13822 61416663 ~ 61416891 (-) True G168099
TU191393 lncRNA downstream 69193 61307147 ~ 61361520 (-) True LOC118941125
TU191379 lncRNA downstream 135793 61290149 ~ 61294920 (-) False LOC110493186
TU191386 lncRNA downstream 161695 61268566 ~ 61269018 (-) True G168033
TU191368 lncRNA downstream 170770 61259069 ~ 61259943 (-) True G168024
TU191495 lncRNA upstream 64209 61495232 ~ 61495725 (-) True G168129
TU191498 lncRNA upstream 67384 61498407 ~ 61498825 (-) True G168132
TU191499 lncRNA upstream 77111 61508134 ~ 61509299 (-) True G168133
TU191505 lncRNA upstream 81878 61512901 ~ 61513251 (-) True G168139
TU191509 lncRNA upstream 87844 61518867 ~ 61519213 (-) True G168143
LOC118936773 mRNA downstream 2246 61417500 ~ 61428467 (-) True LOC118936773
XM_021567516.2 mRNA downstream 15411 61370307 ~ 61415302 (-) True LOC110493250
XM_021567519.2 mRNA downstream 15515 61370307 ~ 61415198 (-) False LOC110493250
XR_002469111.2 mRNA downstream 48507 61380548 ~ 61382206 (-) True LOC110493274
XR_005039489.1 mRNA downstream 59512 61371088 ~ 61371201 (-) True LOC118944178
XM_021567545.2 mRNA upstream 5192 61436215 ~ 61464085 (-) False LOC110493282
XM_021567552.2 mRNA upstream 5192 61436215 ~ 61464107 (-) False LOC110493282
XM_021567539.2 mRNA upstream 5192 61436215 ~ 61464302 (-) False LOC110493282
XM_021567560.2 mRNA upstream 5192 61436215 ~ 61464302 (-) False LOC110493282
XM_021567566.2 mRNA upstream 5192 61436215 ~ 61464302 (-) False LOC110493282
TU191382 other downstream 130621 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 174698 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 455692 60974762 ~ 60975021 (-) True G167866
TU191030 other downstream 690362 60735971 ~ 60740351 (-) True G167706
TU191049 other downstream 751672 60678723 ~ 60679041 (-) True G167723
TU191442 other upstream 59411 61490434 ~ 61491671 (-) True G168078
TU191507 other upstream 84214 61515237 ~ 61515656 (-) True G168141
TU193660 other upstream 1715751 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2528500 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 2734940 64165963 ~ 64168398 (-) True tmem117

Expression Profile