RNA id: TU191495


Basic Information

Item Value
RNA id TU191495
length 494
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G168129
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61495232 ~ 61495725 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttaactgttttgaactctAAGCAAATGTAGGAAACGTAGGAAACAGTAATGTaggaaacattatgctgaagtacttAAATTCACAGAAACATATGAATCTCAGgatgttatgtgctagctgggtatccaGTACCATTCCCAGAACCTGAGAAGGTTGTATGCACAACAACCATAAGACAACAACACTCTCGCCGAGCTCTAAAAAACATATTGTTCTCAGAACTTGCTGGGTACTTGTGCTTGCTgggtttatttgtttatttgatgATGTCCCAATCTTTCTGAATTCACCCTATAACCAtagtagcaattgaaagggaacacttTCGAGATGGGGAAATTATCAGaccaaaggtgaggacacaacagttcacctgacacaagactgaattcAAACATTACAcagttgattttatgtgcattttacatttactgtacttttcacagCATTTGTAAATAACTACATTTGAAAATAcactggatacattcagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191474 lncRNA downstream 64209 61430713 ~ 61431023 (-) True G168108
TU191465 lncRNA downstream 78341 61416663 ~ 61416891 (-) True G168099
TU191393 lncRNA downstream 133712 61307147 ~ 61361520 (-) True LOC118941125
TU191379 lncRNA downstream 200312 61290149 ~ 61294920 (-) False LOC110493186
TU191386 lncRNA downstream 226214 61268566 ~ 61269018 (-) True G168033
TU191498 lncRNA upstream 2682 61498407 ~ 61498825 (-) True G168132
TU191499 lncRNA upstream 12409 61508134 ~ 61509299 (-) True G168133
TU191505 lncRNA upstream 17176 61512901 ~ 61513251 (-) True G168139
TU191509 lncRNA upstream 23142 61518867 ~ 61519213 (-) True G168143
TU191510 lncRNA upstream 24007 61519732 ~ 61520155 (-) True G168144
XM_021567539.2 mRNA downstream 30930 61436215 ~ 61464302 (-) False LOC110493282
XM_021567560.2 mRNA downstream 30930 61436215 ~ 61464302 (-) False LOC110493282
XM_021567566.2 mRNA downstream 30930 61436215 ~ 61464302 (-) False LOC110493282
XM_021567574.2 mRNA downstream 30930 61436215 ~ 61464302 (-) False LOC110493282
XM_021567577.2 mRNA downstream 30930 61436215 ~ 61464302 (-) True LOC110493282
XM_036952527.1 mRNA upstream 671693 62167418 ~ 62217631 (-) False mon2
XM_036952531.1 mRNA upstream 671693 62167418 ~ 62217631 (-) False mon2
XM_036952538.1 mRNA upstream 671693 62167418 ~ 62217631 (-) False mon2
XM_036952541.1 mRNA upstream 671693 62167418 ~ 62217631 (-) False mon2
XM_036952533.1 mRNA upstream 671693 62167418 ~ 62217632 (-) False mon2
TU191442 other downstream 3561 61490434 ~ 61491671 (-) True G168078
TU191382 other downstream 195140 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 239217 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 520211 60974762 ~ 60975021 (-) True G167866
TU191030 other downstream 754881 60735971 ~ 60740351 (-) True G167706
TU191507 other upstream 19512 61515237 ~ 61515656 (-) True G168141
TU193660 other upstream 1651049 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2463798 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 2670238 64165963 ~ 64168398 (-) True tmem117
TU195797 other upstream 3589847 65085572 ~ 65086188 (-) True G172141

Expression Profile