RNA id: TU191498


Basic Information

Item Value
RNA id TU191498
length 419
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G168132
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61498407 ~ 61498825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATATACTACTGTATACTAGAGACAATTCCTACAGGACTTCCTTATGATGATCCCTCGTTCAACATGATGTTCCATATACACATGCAATAGAAATGTAAGAAATACACAAATGTTTGTTTAGGCTACATTTGTTTTTCTTGTTTTAGCCTACTACTCACTTTTTGCAACATTTCAGTTCTCTTTATTTGGAAAGCCTGtcaagataaaaaaaaatcatcatctaCAGCATGATTTGTTTAGGCTACATTTGTTTTTCTTGTTTTAGCCTACTACTCACTCTCAGGCAGTGTTGGGTAGATTCCTCTCTAAATGTAGGCCTAATCTATTACAGTTACTACGCaaatagcacatttggttccttggaagttgtgggaaggtacgtttttggtttcccattggttcttgGTACAAAGCTATAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191495 lncRNA downstream 2682 61495232 ~ 61495725 (-) True G168129
TU191474 lncRNA downstream 67384 61430713 ~ 61431023 (-) True G168108
TU191465 lncRNA downstream 81516 61416663 ~ 61416891 (-) True G168099
TU191393 lncRNA downstream 136887 61307147 ~ 61361520 (-) True LOC118941125
TU191379 lncRNA downstream 203487 61290149 ~ 61294920 (-) False LOC110493186
TU191499 lncRNA upstream 9309 61508134 ~ 61509299 (-) True G168133
TU191505 lncRNA upstream 14076 61512901 ~ 61513251 (-) True G168139
TU191509 lncRNA upstream 20042 61518867 ~ 61519213 (-) True G168143
TU191510 lncRNA upstream 20907 61519732 ~ 61520155 (-) True G168144
TU191601 lncRNA upstream 310832 61809657 ~ 61812532 (-) True G168232
XM_021567539.2 mRNA downstream 34105 61436215 ~ 61464302 (-) False LOC110493282
XM_036952527.1 mRNA upstream 668593 62167418 ~ 62217631 (-) False mon2
XM_036952531.1 mRNA upstream 668593 62167418 ~ 62217631 (-) False mon2
XM_036952538.1 mRNA upstream 668593 62167418 ~ 62217631 (-) False mon2
XM_036952541.1 mRNA upstream 668593 62167418 ~ 62217631 (-) False mon2
XM_036952533.1 mRNA upstream 668593 62167418 ~ 62217632 (-) False mon2
TU191442 other downstream 6736 61490434 ~ 61491671 (-) True G168078
TU191382 other downstream 198315 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 242392 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 523386 60974762 ~ 60975021 (-) True G167866
TU191030 other downstream 758056 60735971 ~ 60740351 (-) True G167706
TU191507 other upstream 16412 61515237 ~ 61515656 (-) True G168141
TU193660 other upstream 1647949 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2460698 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 2667138 64165963 ~ 64168398 (-) True tmem117
TU195797 other upstream 3586747 65085572 ~ 65086188 (-) True G172141

Expression Profile