RNA id: TU191509


Basic Information

Item Value
RNA id TU191509
length 347
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G168143
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61518867 ~ 61519213 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTTTAACGTTATATACAGCCTCAGTGACTGTTCAAGCAAACAACAACACTGGAGGCCTATTGGAACTACTAAAAAGTATGAAGTTTACAAGtaattaaatacaaaaaatatagGCTATTTGGAAAGGACACAATGGCTGCAACCTCGGTCAGTGATGGTGGGAGTGGTTTTGCCGAATGGACCCATAGGAGTTTGAGCCTTGAACAACAGAAAAATATTGAGTAACTACTCTCATTCTACAGGTTTTTAAGCATCTAGTTACAGACGGTAGACTAAGACATCCAGAGCAACACATAGCAGGGAGCTCCAATATGATCAGGAAACTAGACCGGTTATATAGATCGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191505 lncRNA downstream 5616 61512901 ~ 61513251 (-) True G168139
TU191499 lncRNA downstream 9568 61508134 ~ 61509299 (-) True G168133
TU191498 lncRNA downstream 20042 61498407 ~ 61498825 (-) True G168132
TU191495 lncRNA downstream 23142 61495232 ~ 61495725 (-) True G168129
TU191474 lncRNA downstream 87844 61430713 ~ 61431023 (-) True G168108
TU191510 lncRNA upstream 519 61519732 ~ 61520155 (-) True G168144
TU191601 lncRNA upstream 290444 61809657 ~ 61812532 (-) True G168232
TU191618 lncRNA upstream 367044 61886257 ~ 61921922 (-) True G168249
TU191635 lncRNA upstream 408107 61927320 ~ 61927556 (-) True G168266
TU191650 lncRNA upstream 419190 61938403 ~ 61938623 (-) True G168281
XM_021567539.2 mRNA downstream 54565 61436215 ~ 61464302 (-) False LOC110493282
XM_036952527.1 mRNA upstream 648205 62167418 ~ 62217631 (-) False mon2
XM_036952531.1 mRNA upstream 648205 62167418 ~ 62217631 (-) False mon2
XM_036952538.1 mRNA upstream 648205 62167418 ~ 62217631 (-) False mon2
XM_036952541.1 mRNA upstream 648205 62167418 ~ 62217631 (-) False mon2
XM_036952533.1 mRNA upstream 648205 62167418 ~ 62217632 (-) False mon2
TU191507 other downstream 3211 61515237 ~ 61515656 (-) True G168141
TU191442 other downstream 27196 61490434 ~ 61491671 (-) True G168078
TU191382 other downstream 218775 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 262852 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 543846 60974762 ~ 60975021 (-) True G167866
TU193660 other upstream 1627561 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 2440310 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 2646750 64165963 ~ 64168398 (-) True tmem117
TU195797 other upstream 3566359 65085572 ~ 65086188 (-) True G172141
TU196875 other upstream 3864224 65383437 ~ 65383873 (-) True G173121

Expression Profile