Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU192480 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G169082 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 62711858 ~ 62712057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU192402 | lncRNA | upstream | 7284 | 62701878 ~ 62704574 (+) | True | pparab |
| TU192467 | lncRNA | upstream | 79748 | 62631869 ~ 62632110 (+) | True | G169069 |
| TU192414 | lncRNA | upstream | 86064 | 62625076 ~ 62625794 (+) | True | G169016 |
| TU192411 | lncRNA | upstream | 89947 | 62621232 ~ 62621911 (+) | True | G169013 |
| TU192405 | lncRNA | upstream | 93092 | 62617538 ~ 62618766 (+) | True | LOC110493430 |
| TU192506 | lncRNA | downstream | 48299 | 62760356 ~ 62760657 (+) | True | G169108 |
| TU192512 | lncRNA | downstream | 52587 | 62764644 ~ 62764848 (+) | True | G169114 |
| TU192513 | lncRNA | downstream | 54083 | 62766140 ~ 62766370 (+) | True | G169115 |
| TU192516 | lncRNA | downstream | 57986 | 62770043 ~ 62770304 (+) | True | G169118 |
| TU192515 | lncRNA | downstream | 58689 | 62770746 ~ 62771146 (+) | True | G169117 |
| XM_021617918.2 | mRNA | upstream | 8032 | 62640508 ~ 62703826 (+) | False | pparab |
| XM_021617927.2 | mRNA | upstream | 8032 | 62640508 ~ 62703826 (+) | False | pparab |
| XM_021617937.2 | mRNA | upstream | 8032 | 62690139 ~ 62703826 (+) | False | pparab |
| NM_001197211.1 | mRNA | upstream | 12276 | 62682026 ~ 62699582 (+) | False | pparab |
| XR_005037458.1 | mRNA | upstream | 93021 | 62567354 ~ 62618837 (+) | False | LOC110493430 |
| XM_021567722.2 | mRNA | downstream | 11388 | 62723445 ~ 62737914 (+) | False | LOC110493442 |
| XM_036952649.1 | mRNA | downstream | 11388 | 62723445 ~ 62737914 (+) | False | LOC110493442 |
| XM_021567713.2 | mRNA | downstream | 11389 | 62723446 ~ 62737914 (+) | True | LOC110493442 |
| XR_005037459.1 | mRNA | downstream | 214689 | 62926746 ~ 62927472 (+) | True | LOC118941152 |
| XM_021567767.2 | mRNA | downstream | 295266 | 63007323 ~ 63022862 (+) | True | mrps35 |
| TU190972 | other | upstream | 831434 | 61879770 ~ 61880424 (+) | True | LOC118936783 |
| TU190931 | other | upstream | 984404 | 61726959 ~ 61727454 (+) | True | G167609 |
| TU190863 | other | upstream | 1179531 | 61531589 ~ 61532327 (+) | True | LOC110510683 |
| TU190618 | other | upstream | 1479313 | 61232196 ~ 61232545 (+) | True | G167325 |
| TU190578 | other | upstream | 1637267 | 61062593 ~ 61074591 (+) | True | G167288 |
| TU192528 | other | downstream | 73301 | 62785358 ~ 62785643 (+) | True | G169130 |
| TU193588 | other | downstream | 1108404 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU193612 | other | downstream | 1161191 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU196081 | other | downstream | 2819089 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU196056 | other | downstream | 2881460 | 65593517 ~ 65640976 (+) | False | jph3 |
