Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028418 |
| length | 1461 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 10 |
| gene id | XLOC_014298 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 43750676 ~ 43768721 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-7188 | Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000058504 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00028415 | lncRNA | upstream | 29140 | 43715970 ~ 43724855 (+) | False | XLOC_014297 |
| TCONS_00028407 | lncRNA | upstream | 154651 | 43592839 ~ 43599344 (+) | True | XLOC_014293 |
| TCONS_00030040 | lncRNA | upstream | 204984 | 43546647 ~ 43549011 (+) | False | XLOC_014291 |
| TCONS_00030039 | lncRNA | upstream | 204984 | 43546647 ~ 43549011 (+) | True | XLOC_014291 |
| TCONS_00028400 | lncRNA | upstream | 329850 | 43420765 ~ 43424145 (+) | True | XLOC_014287 |
| TCONS_00030041 | lncRNA | downstream | 18282 | 43787003 ~ 43791576 (+) | True | XLOC_014300 |
| TCONS_00030042 | lncRNA | downstream | 18421 | 43787142 ~ 43790716 (+) | True | XLOC_014301 |
| TCONS_00030043 | lncRNA | downstream | 32111 | 43800832 ~ 43804410 (+) | False | XLOC_014302 |
| TCONS_00030044 | lncRNA | downstream | 32456 | 43801177 ~ 43804410 (+) | True | XLOC_014302 |
| TCONS_00029734 | lncRNA | downstream | 1148378 | 44917099 ~ 44959698 (+) | False | XLOC_014314 |
| TCONS_00028414 | mRNA | upstream | 16924 | 43715911 ~ 43737071 (+) | False | XLOC_014297 |
| TCONS_00028416 | mRNA | upstream | 27298 | 43716607 ~ 43726697 (+) | True | XLOC_014297 |
| TCONS_00028412 | mRNA | upstream | 46734 | 43669122 ~ 43707261 (+) | False | XLOC_014296 |
| TCONS_00028413 | mRNA | upstream | 47263 | 43684376 ~ 43706732 (+) | True | XLOC_014296 |
| TCONS_00028409 | mRNA | upstream | 142115 | 43604257 ~ 43611880 (+) | False | XLOC_014294 |
| TCONS_00028419 | mRNA | downstream | 12249 | 43780970 ~ 43786940 (+) | True | XLOC_014299 |
| TCONS_00028420 | mRNA | downstream | 54247 | 43822968 ~ 43833995 (+) | False | XLOC_014303 |
| TCONS_00028421 | mRNA | downstream | 59383 | 43828104 ~ 43833995 (+) | True | XLOC_014303 |
| TCONS_00028422 | mRNA | downstream | 109328 | 43878049 ~ 43880951 (+) | True | XLOC_014304 |
| TCONS_00028423 | mRNA | downstream | 115399 | 43884120 ~ 43901467 (+) | False | XLOC_014305 |
| TCONS_00028411 | other | upstream | 88484 | 43665391 ~ 43665511 (+) | True | XLOC_014295 |
| TCONS_00028401 | other | upstream | 302048 | 43439401 ~ 43451947 (+) | False | XLOC_014288 |
| TCONS_00028380 | other | upstream | 672935 | 43080925 ~ 43081060 (+) | True | XLOC_014280 |
| TCONS_00028379 | other | upstream | 676116 | 43077744 ~ 43077879 (+) | True | XLOC_014279 |
| TCONS_00028365 | other | upstream | 838454 | 42915419 ~ 42915541 (+) | True | XLOC_014274 |
| TCONS_00028433 | other | downstream | 240752 | 44009473 ~ 44032164 (+) | False | XLOC_014312 |
| TCONS_00028436 | other | downstream | 1740144 | 45508865 ~ 45508981 (+) | True | XLOC_014316 |
| TCONS_00028450 | other | downstream | 2474899 | 46243620 ~ 46280931 (+) | False | XLOC_014327 |
| TCONS_00028459 | other | downstream | 3530445 | 47299166 ~ 47309383 (+) | False | XLOC_014336 |
| TCONS_00028462 | other | downstream | 3537902 | 47306623 ~ 47306738 (+) | True | XLOC_014337 |
