Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196048 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G172386 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65482192 ~ 65482461 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196047 | lncRNA | upstream | 50 | 65481723 ~ 65482142 (+) | True | G172385 |
| TU196041 | lncRNA | upstream | 6674 | 65475310 ~ 65475518 (+) | True | G172379 |
| TU196010 | lncRNA | upstream | 43809 | 65436992 ~ 65438383 (+) | True | G172350 |
| TU195803 | lncRNA | upstream | 376410 | 65104584 ~ 65105782 (+) | True | G172147 |
| TU195244 | lncRNA | upstream | 580243 | 64842764 ~ 64901949 (+) | True | G171609 |
| TU196049 | lncRNA | downstream | 160 | 65482621 ~ 65483071 (+) | True | G172387 |
| TU196050 | lncRNA | downstream | 614 | 65483075 ~ 65484436 (+) | True | G172388 |
| TU196051 | lncRNA | downstream | 5578 | 65488039 ~ 65488869 (+) | True | G172389 |
| TU196150 | lncRNA | downstream | 131761 | 65614222 ~ 65618491 (+) | True | G172472 |
| TU196151 | lncRNA | downstream | 133276 | 65615737 ~ 65617095 (+) | False | G172473 |
| XM_036953106.1 | mRNA | upstream | 457327 | 64866284 ~ 65024865 (+) | False | LOC110493825 |
| XM_036953095.1 | mRNA | upstream | 457327 | 64866285 ~ 65024865 (+) | True | LOC110493825 |
| XM_036953047.1 | mRNA | upstream | 722799 | 64666137 ~ 64759393 (+) | False | akap13 |
| XM_036953227.1 | mRNA | downstream | 48665 | 65531126 ~ 65536782 (+) | False | map1lc3b |
| XM_021568438.2 | mRNA | downstream | 111007 | 65593468 ~ 65648660 (+) | False | jph3 |
| XM_021568445.2 | mRNA | downstream | 111007 | 65593468 ~ 65648660 (+) | False | jph3 |
| XM_021568559.2 | mRNA | downstream | 310128 | 65792589 ~ 65801972 (+) | True | lcat |
| XM_021568592.2 | mRNA | downstream | 329769 | 65812230 ~ 65821040 (+) | True | pla2g15 |
| TU193612 | other | upstream | 1603959 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU193588 | other | upstream | 1651872 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU192528 | other | upstream | 2696549 | 62785358 ~ 62785643 (+) | True | G169130 |
| TU190972 | other | upstream | 3601768 | 61879770 ~ 61880424 (+) | True | LOC118936783 |
| TU190931 | other | upstream | 3754738 | 61726959 ~ 61727454 (+) | True | G167609 |
| TU196081 | other | downstream | 48685 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU196056 | other | downstream | 111056 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | downstream | 111056 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196344 | other | downstream | 453135 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196564 | other | downstream | 780165 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
