Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196183 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G172500 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65669050 ~ 65669695 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196181 | lncRNA | upstream | 306 | 65668517 ~ 65668744 (+) | True | G172499 |
| TU196177 | lncRNA | upstream | 6413 | 65661840 ~ 65662637 (+) | True | G172495 |
| TU196150 | lncRNA | upstream | 50559 | 65614222 ~ 65618491 (+) | True | G172472 |
| TU196152 | lncRNA | upstream | 51289 | 65615737 ~ 65617761 (+) | True | G172473 |
| TU196151 | lncRNA | upstream | 51955 | 65615737 ~ 65617095 (+) | False | G172473 |
| TU196194 | lncRNA | downstream | 12184 | 65681879 ~ 65682936 (+) | True | G172508 |
| TU196195 | lncRNA | downstream | 13667 | 65683362 ~ 65683572 (+) | True | G172509 |
| TU196196 | lncRNA | downstream | 14407 | 65684102 ~ 65684494 (+) | True | G172510 |
| TU196219 | lncRNA | downstream | 41901 | 65711596 ~ 65712438 (+) | True | G172531 |
| TU196224 | lncRNA | downstream | 48227 | 65717922 ~ 65718293 (+) | True | G172535 |
| XM_021568438.2 | mRNA | upstream | 20390 | 65593468 ~ 65648660 (+) | False | jph3 |
| XM_021568445.2 | mRNA | upstream | 20390 | 65593468 ~ 65648660 (+) | False | jph3 |
| XM_036953227.1 | mRNA | upstream | 132268 | 65531126 ~ 65536782 (+) | False | map1lc3b |
| XM_036953106.1 | mRNA | upstream | 644185 | 64866284 ~ 65024865 (+) | False | LOC110493825 |
| XM_021568559.2 | mRNA | downstream | 122894 | 65792589 ~ 65801972 (+) | True | lcat |
| XM_021568592.2 | mRNA | downstream | 142535 | 65812230 ~ 65821040 (+) | True | pla2g15 |
| XM_021568579.2 | mRNA | downstream | 160420 | 65830115 ~ 65839097 (+) | False | znf319b |
| XM_021568571.2 | mRNA | downstream | 160424 | 65830119 ~ 65839097 (+) | True | znf319b |
| XM_036953375.1 | mRNA | downstream | 182810 | 65852505 ~ 65865562 (+) | False | LOC110493986 |
| TU196056 | other | upstream | 28074 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | upstream | 28074 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196081 | other | upstream | 132263 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU193612 | other | upstream | 1790817 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU193588 | other | upstream | 1838730 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU196344 | other | downstream | 265901 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196564 | other | downstream | 592931 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU197812 | other | downstream | 1072125 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU197931 | other | downstream | 1285829 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU198150 | other | downstream | 1569195 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
