Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196296 |
| length | 327 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G172592 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65869329 ~ 65870268 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196284 | lncRNA | upstream | 20163 | 65848953 ~ 65849166 (+) | True | G172586 |
| TU196281 | lncRNA | upstream | 22097 | 65846997 ~ 65847232 (+) | True | G172583 |
| TU196280 | lncRNA | upstream | 23792 | 65842248 ~ 65845537 (+) | True | G172582 |
| TU196279 | lncRNA | upstream | 28803 | 65840302 ~ 65840526 (+) | True | G172581 |
| TU196213 | lncRNA | upstream | 134901 | 65730812 ~ 65734428 (+) | True | G172525 |
| TU196335 | lncRNA | downstream | 48645 | 65918913 ~ 65919218 (+) | True | G172630 |
| TU196342 | lncRNA | downstream | 59096 | 65929364 ~ 65929679 (+) | True | G172637 |
| TU196370 | lncRNA | downstream | 95605 | 65965873 ~ 65970958 (+) | True | G172658 |
| TU196352 | lncRNA | downstream | 128627 | 65998895 ~ 65999564 (+) | True | LOC110494008 |
| TU196314 | lncRNA | downstream | 489729 | 66359997 ~ 66363470 (+) | True | LOC110494202 |
| XM_036953346.1 | mRNA | upstream | 3624 | 65852513 ~ 65865705 (+) | True | LOC110493986 |
| XM_036953375.1 | mRNA | upstream | 3767 | 65852505 ~ 65865562 (+) | False | LOC110493986 |
| XM_036953369.1 | mRNA | upstream | 3767 | 65852508 ~ 65865562 (+) | False | LOC110493986 |
| XM_036953361.1 | mRNA | upstream | 3767 | 65852510 ~ 65865562 (+) | False | LOC110493986 |
| XM_036953350.1 | mRNA | upstream | 3767 | 65852513 ~ 65865562 (+) | False | LOC110493986 |
| XM_021568646.2 | mRNA | downstream | 14525 | 65884793 ~ 65917366 (+) | True | LOC110493994 |
| XM_036953388.1 | mRNA | downstream | 72891 | 65943159 ~ 65958750 (+) | True | LOC110494001 |
| XM_036953398.1 | mRNA | downstream | 105477 | 65975745 ~ 66031253 (+) | False | LOC110494008 |
| XM_036953395.1 | mRNA | downstream | 105480 | 65975748 ~ 66029763 (+) | False | LOC110494008 |
| XM_036953407.1 | mRNA | downstream | 105480 | 65975748 ~ 66030944 (+) | False | LOC110494008 |
| TU196056 | other | upstream | 228353 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | upstream | 228353 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196081 | other | upstream | 332542 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU193612 | other | upstream | 1991096 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU193588 | other | upstream | 2039009 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU196344 | other | downstream | 65328 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196564 | other | downstream | 392358 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU197812 | other | downstream | 871552 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU197931 | other | downstream | 1085256 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU198150 | other | downstream | 1368622 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
