Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU197656 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G173804 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66530115 ~ 66530338 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196314 | lncRNA | upstream | 166645 | 66359997 ~ 66363470 (+) | True | LOC110494202 |
| TU196352 | lncRNA | upstream | 530551 | 65998895 ~ 65999564 (+) | True | LOC110494008 |
| TU196370 | lncRNA | upstream | 559157 | 65965873 ~ 65970958 (+) | True | G172658 |
| TU196342 | lncRNA | upstream | 600436 | 65929364 ~ 65929679 (+) | True | G172637 |
| TU196335 | lncRNA | upstream | 610897 | 65918913 ~ 65919218 (+) | True | G172630 |
| TU197657 | lncRNA | downstream | 114 | 66530452 ~ 66530710 (+) | True | G173805 |
| TU197658 | lncRNA | downstream | 1328 | 66531666 ~ 66531887 (+) | True | G173806 |
| TU197660 | lncRNA | downstream | 3120 | 66533458 ~ 66533659 (+) | True | G173808 |
| TU197700 | lncRNA | downstream | 4876 | 66535214 ~ 66535447 (+) | True | G173835 |
| TU197709 | lncRNA | downstream | 82306 | 66612644 ~ 66614161 (+) | True | G173843 |
| XM_036953694.1 | mRNA | upstream | 554 | 66508242 ~ 66529561 (+) | False | LOC110494260 |
| XM_021569205.2 | mRNA | upstream | 554 | 66508244 ~ 66529561 (+) | False | LOC110494260 |
| XM_036953707.1 | mRNA | upstream | 554 | 66516421 ~ 66529561 (+) | False | LOC110494260 |
| XM_021569214.2 | mRNA | upstream | 554 | 66516635 ~ 66529561 (+) | True | LOC110494260 |
| XM_021569184.2 | mRNA | upstream | 22125 | 66496959 ~ 66507990 (+) | True | LOC110494252 |
| XM_021569225.2 | mRNA | downstream | 7617 | 66537955 ~ 66547328 (+) | True | LOC110494278 |
| XM_021569233.2 | mRNA | downstream | 19207 | 66549545 ~ 66552357 (+) | True | LOC110494286 |
| XM_021569243.2 | mRNA | downstream | 25209 | 66555547 ~ 66581651 (+) | True | LOC110494295 |
| XM_021569256.2 | mRNA | downstream | 56061 | 66586399 ~ 66611590 (+) | False | vps9d1 |
| XM_021569265.2 | mRNA | downstream | 56061 | 66586399 ~ 66611590 (+) | False | vps9d1 |
| TU196564 | other | upstream | 264092 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU196344 | other | upstream | 593982 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196056 | other | upstream | 889139 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | upstream | 889139 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196081 | other | upstream | 993328 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU197812 | other | downstream | 211482 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU197931 | other | downstream | 425186 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU198150 | other | downstream | 708552 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
| TU198304 | other | downstream | 955825 | 67486163 ~ 67488201 (+) | True | hsbp1b |
| TU200669 | other | downstream | 2330500 | 68860838 ~ 68861368 (+) | True | G176612 |
