Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU198227 |
| length | 432 |
| lncRNA type | antisense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G174319 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 67354078 ~ 67354509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
67,352,800
67,353,200
67,353,600
67,354,000
67,354,400
67,354,800
67,355,200
67,355,600
67,356,000
67,356,400
67,356,800
67,357,200
NC_048566.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU198178 | lncRNA | upstream | 90623 | 67263175 ~ 67263455 (+) | True | G174273 |
| TU198173 | lncRNA | upstream | 96863 | 67256953 ~ 67257215 (+) | True | G174268 |
| TU198159 | lncRNA | upstream | 117899 | 67235572 ~ 67236179 (+) | True | G174254 |
| TU198152 | lncRNA | upstream | 124002 | 67229078 ~ 67230076 (+) | True | has3 |
| TU198153 | lncRNA | upstream | 124693 | 67228754 ~ 67229385 (+) | False | has3 |
| TU198235 | lncRNA | downstream | 13645 | 67368154 ~ 67402620 (+) | True | G174327 |
| TU198286 | lncRNA | downstream | 104047 | 67458556 ~ 67461685 (+) | True | G174377 |
| TU199042 | lncRNA | downstream | 204454 | 67558963 ~ 67559195 (+) | True | G175062 |
| TU199051 | lncRNA | downstream | 209546 | 67564055 ~ 67564635 (+) | True | G175071 |
| TU199058 | lncRNA | downstream | 219220 | 67573729 ~ 67573939 (+) | True | G175078 |
| XM_021569567.2 | mRNA | upstream | 114176 | 67232278 ~ 67239902 (+) | False | LOC110494472 |
| XM_036953918.1 | mRNA | upstream | 123860 | 67216792 ~ 67230218 (+) | False | has3 |
| XM_036953931.1 | mRNA | upstream | 123860 | 67216792 ~ 67230218 (+) | False | has3 |
| XM_021569582.2 | mRNA | upstream | 123860 | 67216793 ~ 67230218 (+) | False | has3 |
| XM_021569556.2 | mRNA | upstream | 139730 | 67181100 ~ 67214348 (+) | False | tango6 |
| XM_021569688.2 | mRNA | downstream | 131619 | 67486128 ~ 67488205 (+) | False | hsbp1b |
| XM_021569726.2 | mRNA | downstream | 169901 | 67524410 ~ 67536975 (+) | True | LOC110494554 |
| XM_036954070.1 | mRNA | downstream | 1049150 | 68403659 ~ 68551466 (+) | False | LOC110501822 |
| XM_036954080.1 | mRNA | downstream | 1049150 | 68403659 ~ 68551466 (+) | False | LOC110501822 |
| XM_036954086.1 | mRNA | downstream | 1049152 | 68403661 ~ 68551466 (+) | True | LOC110501822 |
| TU198150 | other | upstream | 114182 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
| TU197931 | other | upstream | 381623 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU197812 | other | upstream | 611865 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU196564 | other | upstream | 1088055 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU196344 | other | upstream | 1417945 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU198304 | other | downstream | 131654 | 67486163 ~ 67488201 (+) | True | hsbp1b |
| TU200669 | other | downstream | 1506329 | 68860838 ~ 68861368 (+) | True | G176612 |
| TU200792 | other | downstream | 1601754 | 68956263 ~ 68957886 (+) | True | G176725 |
| TU201174 | other | downstream | 2102049 | 69456558 ~ 69457433 (+) | True | G177067 |
| TU201991 | other | downstream | 2752777 | 70107286 ~ 70113440 (+) | False | G177812 |
