Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028460 |
| length | 748 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | XLOC_014336 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 47299166 ~ 47309383 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008119 | thiopurine S-methyltransferase activity | molecular_function |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041010-177 | Predicted to enable thiopurine S-methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia; alopecia; leukopenia; and thiopurine S-methyltransferase deficiency. Orthologous to human TPMT (thiopurine S-methyltransferase). |
| ensembl_id | ENSDART00000158262 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030050 | lncRNA | upstream | 107711 | 47188530 ~ 47191501 (+) | True | XLOC_014334 |
| TCONS_00030049 | lncRNA | upstream | 861077 | 46423091 ~ 46438135 (+) | True | XLOC_014331 |
| TCONS_00030048 | lncRNA | upstream | 1018281 | 46240507 ~ 46280931 (+) | False | XLOC_014327 |
| TCONS_00029735 | lncRNA | upstream | 1080172 | 46216335 ~ 46219040 (+) | False | XLOC_014325 |
| TCONS_00030051 | lncRNA | downstream | 28356 | 47337582 ~ 47338157 (+) | True | XLOC_014339 |
| TCONS_00028467 | lncRNA | downstream | 111834 | 47421060 ~ 47423627 (+) | True | XLOC_014340 |
| TCONS_00030052 | lncRNA | downstream | 128978 | 47438204 ~ 47448594 (+) | True | XLOC_014341 |
| TCONS_00029737 | lncRNA | downstream | 280803 | 47590029 ~ 47591236 (+) | True | XLOC_014345 |
| TCONS_00029738 | lncRNA | downstream | 473866 | 47783092 ~ 47784972 (+) | False | XLOC_014346 |
| TCONS_00028458 | mRNA | upstream | 555 | 47290287 ~ 47298657 (+) | True | XLOC_014335 |
| TCONS_00028457 | mRNA | upstream | 161787 | 47135677 ~ 47137425 (+) | True | XLOC_014333 |
| TCONS_00028456 | mRNA | upstream | 473529 | 46824723 ~ 46825683 (+) | True | XLOC_014332 |
| TCONS_00028455 | mRNA | upstream | 887854 | 46372115 ~ 46411358 (+) | True | XLOC_014330 |
| TCONS_00028453 | mRNA | upstream | 936980 | 46343385 ~ 46362232 (+) | False | XLOC_014329 |
| TCONS_00028463 | mRNA | downstream | 1794 | 47311020 ~ 47336002 (+) | False | XLOC_014338 |
| TCONS_00028464 | mRNA | downstream | 2643 | 47311869 ~ 47336408 (+) | True | XLOC_014338 |
| TCONS_00028465 | mRNA | downstream | 85044 | 47394270 ~ 47423628 (+) | False | XLOC_014340 |
| TCONS_00028466 | mRNA | downstream | 96641 | 47405867 ~ 47423628 (+) | False | XLOC_014340 |
| TCONS_00028468 | mRNA | downstream | 167682 | 47476908 ~ 47481618 (+) | True | XLOC_014342 |
| TCONS_00028450 | other | upstream | 1018281 | 46243620 ~ 46280931 (+) | False | XLOC_014327 |
| TCONS_00028436 | other | upstream | 1790231 | 45508865 ~ 45508981 (+) | True | XLOC_014316 |
| TCONS_00028433 | other | upstream | 3267048 | 44009473 ~ 44032164 (+) | False | XLOC_014312 |
| TCONS_00028411 | other | upstream | 3633701 | 43665391 ~ 43665511 (+) | True | XLOC_014295 |
| TCONS_00028401 | other | upstream | 3847265 | 43439401 ~ 43451947 (+) | False | XLOC_014288 |
| TCONS_00028470 | other | downstream | 265389 | 47574615 ~ 47574823 (+) | True | XLOC_014344 |
| TCONS_00028474 | other | downstream | 708780 | 48018006 ~ 48018346 (+) | True | XLOC_014351 |
| TCONS_00028479 | other | downstream | 709580 | 48018806 ~ 48023408 (+) | False | XLOC_014352 |
| TCONS_00028484 | other | downstream | 724073 | 48033299 ~ 48033440 (+) | True | XLOC_014354 |
