RNA id: TU207490



Basic Information


Item Value
RNA id TU207490
length 268
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G182883
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73677279 ~ 73677546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aatgcagtaataaccaacaagtaatctagctaacaattccaaaactactaccttatagacacaagtgtaaggggataaagaatatgtacataaagatatatgaatgagtgatggtacagagcggcataggcaagatacagtagatggtattgagtgcagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgagacatgtattacataaagatgcagtagatgatatagagtacagtatatacata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207488 lncRNA downstream 1675 73675379 ~ 73675604 (-) True G182881
TU207483 lncRNA downstream 8089 73668955 ~ 73669190 (-) True G182876
TU207448 lncRNA downstream 45543 73600852 ~ 73631736 (-) True G182841
TU207434 lncRNA downstream 105243 73571600 ~ 73572036 (-) True G182831
TU207432 lncRNA downstream 106856 73570202 ~ 73570423 (-) True G182829
TU207510 lncRNA upstream 26219 73703765 ~ 73704092 (-) True G182903
TU207699 lncRNA upstream 303782 73981328 ~ 73987065 (-) True G183084
TU207707 lncRNA upstream 313794 73991340 ~ 73991675 (-) False G183092
TU207711 lncRNA upstream 313834 73991380 ~ 73991675 (-) False G183092
TU207708 lncRNA upstream 313885 73991431 ~ 73991675 (-) True G183092
XM_021571414.2 mRNA downstream 31143 73610274 ~ 73646136 (-) True rasgrf1
XM_021571425.2 mRNA downstream 67162 73606889 ~ 73610117 (-) True ctsh
XM_021571402.2 mRNA downstream 71406 73579896 ~ 73605873 (-) True blm
XM_021571388.2 mRNA downstream 71408 73579896 ~ 73605871 (-) False blm
XM_021571454.2 mRNA upstream 61636 73739182 ~ 73749958 (-) True si:ch211-107o10.3
XM_021571468.2 mRNA upstream 91038 73768584 ~ 73775448 (-) False LOC110495933
XM_036955327.1 mRNA upstream 91038 73768584 ~ 73775448 (-) False LOC110495933
XM_036955333.1 mRNA upstream 91038 73768584 ~ 73775448 (-) False LOC110495933
XM_036955341.1 mRNA upstream 91038 73768584 ~ 73775448 (-) False LOC110495933
TU207489 other downstream 856 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 331432 73344950 ~ 73345847 (-) True G182708
TU207075 other downstream 598900 73076027 ~ 73078379 (-) True LOC110495704
TU207073 other downstream 610555 73027384 ~ 73066724 (-) False G182494
TU207071 other downstream 615966 73056242 ~ 73061313 (-) False G182494
TU207716 other upstream 315532 73993078 ~ 73993545 (-) True G183096
TU208238 other upstream 429337 74106883 ~ 74110791 (-) True G183538
TU208774 other upstream 1053326 74730872 ~ 74732637 (-) True G184006
TU210008 other upstream 1928681 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 2199813 75877359 ~ 75878060 (-) True G186002

Expression Profile