RNA id: TU207510



Basic Information


Item Value
RNA id TU207510
length 328
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G182903
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73703765 ~ 73704092 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcacccgcccgcccgactagcatcactactctggacggttctgacttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaagcatctccaatccaaaattaaatctagaatcggcttcctatttcgcaacaaagcatccttcactcacgctgccaaacacaccctcgtaaaactgactatcctaccgatccttgactttggcgatgtcatttacaaaatagcctccaacactctactcagtaaattggatgcagtctatcacagtgccatccgttctgTCACTAAGgccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207490 lncRNA downstream 26219 73677279 ~ 73677546 (-) True G182883
TU207488 lncRNA downstream 28161 73675379 ~ 73675604 (-) True G182881
TU207483 lncRNA downstream 34575 73668955 ~ 73669190 (-) True G182876
TU207448 lncRNA downstream 72029 73600852 ~ 73631736 (-) True G182841
TU207434 lncRNA downstream 131729 73571600 ~ 73572036 (-) True G182831
TU207699 lncRNA upstream 277236 73981328 ~ 73987065 (-) True G183084
TU207707 lncRNA upstream 287248 73991340 ~ 73991675 (-) False G183092
TU207711 lncRNA upstream 287288 73991380 ~ 73991675 (-) False G183092
TU207708 lncRNA upstream 287339 73991431 ~ 73991675 (-) True G183092
TU207718 lncRNA upstream 290629 73994721 ~ 73995001 (-) True G183098
XM_021571414.2 mRNA downstream 57629 73610274 ~ 73646136 (-) True rasgrf1
XM_021571425.2 mRNA downstream 93648 73606889 ~ 73610117 (-) True ctsh
XM_021571402.2 mRNA downstream 97892 73579896 ~ 73605873 (-) True blm
XM_021571388.2 mRNA downstream 97894 73579896 ~ 73605871 (-) False blm
XM_021571454.2 mRNA upstream 35090 73739182 ~ 73749958 (-) True si:ch211-107o10.3
XM_021571468.2 mRNA upstream 64492 73768584 ~ 73775448 (-) False LOC110495933
XM_036955327.1 mRNA upstream 64492 73768584 ~ 73775448 (-) False LOC110495933
XM_036955333.1 mRNA upstream 64492 73768584 ~ 73775448 (-) False LOC110495933
XM_036955341.1 mRNA upstream 64492 73768584 ~ 73775448 (-) False LOC110495933
TU207489 other downstream 27342 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 357918 73344950 ~ 73345847 (-) True G182708
TU207075 other downstream 625386 73076027 ~ 73078379 (-) True LOC110495704
TU207073 other downstream 637041 73027384 ~ 73066724 (-) False G182494
TU207716 other upstream 288986 73993078 ~ 73993545 (-) True G183096
TU208238 other upstream 402791 74106883 ~ 74110791 (-) True G183538
TU208774 other upstream 1026780 74730872 ~ 74732637 (-) True G184006
TU210008 other upstream 1902135 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 2173267 75877359 ~ 75878060 (-) True G186002

Expression Profile