RNA id: TU207707



Basic Information


Item Value
RNA id TU207707
length 336
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G183092
representative False

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73991340 ~ 73991675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atgtgatgcaaggGGTAGGTCACGTTCTGAATACTGTTTTCTATTTTCTAATTTACAATGCGTACAAGTTTGCTGTACATTACTAATTTATACATGTGTGGGTATATGGTACCTGTTAGAGATTGAGGGGCTTTCTGGGATGTGCTTTGGCATATGATTGCTGTAAataagtgtgttagctagcatacaCCTATGTAATGGTCACGTAAGCCCACTGCTAACACAGTTGTTTTCATGCTACAGATTTTACCATCGATAGCCATCAACATCGTTAAGCCCtgcacaactaacgtgctgtttccTATTTAACAACATAAATAAATGCTCAACTGGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207699 lncRNA downstream 4275 73981328 ~ 73987065 (-) True G183084
TU207510 lncRNA downstream 287248 73703765 ~ 73704092 (-) True G182903
TU207490 lncRNA downstream 313794 73677279 ~ 73677546 (-) True G182883
TU207488 lncRNA downstream 315736 73675379 ~ 73675604 (-) True G182881
TU207483 lncRNA downstream 322150 73668955 ~ 73669190 (-) True G182876
TU207718 lncRNA upstream 3046 73994721 ~ 73995001 (-) True G183098
TU207735 lncRNA upstream 18823 74010498 ~ 74014381 (-) True LOC110495977
TU208244 lncRNA upstream 27584 74019259 ~ 74020096 (-) True G183544
TU208298 lncRNA upstream 127383 74119058 ~ 74120268 (-) True LOC118941541
TU208303 lncRNA upstream 149362 74141037 ~ 74143053 (-) True G183602
XM_021571468.2 mRNA downstream 215892 73768584 ~ 73775448 (-) False LOC110495933
XM_021571550.2 mRNA upstream 18827 74010502 ~ 74014413 (-) False LOC110495977
XM_021571562.2 mRNA upstream 26844 74018519 ~ 74067110 (-) True LOC110495986
LOC110501884 mRNA upstream 120303 74111978 ~ 74112847 (-) True LOC110501884
XR_005037845.1 mRNA upstream 127391 74119066 ~ 74140876 (-) False LOC118941541
XM_036955467.1 mRNA upstream 130608 74122283 ~ 74125960 (-) False LOC110496007
TU207489 other downstream 314917 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 645493 73344950 ~ 73345847 (-) True G182708
TU207075 other downstream 912961 73076027 ~ 73078379 (-) True LOC110495704
TU207073 other downstream 924616 73027384 ~ 73066724 (-) False G182494
TU207716 other upstream 1403 73993078 ~ 73993545 (-) True G183096
TU208238 other upstream 115208 74106883 ~ 74110791 (-) True G183538
TU208774 other upstream 739197 74730872 ~ 74732637 (-) True G184006
TU210008 other upstream 1614552 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 1885684 75877359 ~ 75878060 (-) True G186002

Expression Profile