RNA id: TU207740



Basic Information


Item Value
RNA id TU207740
length 347
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G183117
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74016014 ~ 74016360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atacatatgagatgagtaatgcaaaatatgtgaacattattaaagcgactagtgttccatttattaaagtggccagataTTTGAAGTATATGTACATAGGCAGCAGCCtgtaatgtgctagtgatggctataacagtctgatggtcttgcgatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactcaccttgccttctggatgatagcgaggtgaacaggcagtggctcgggtggttgttgtccttgatggtctttttggccttcctgtgacatcgggtgctgtaggtgtcctggagggcaggtagtttgcttcTGGTGATGcgtctggag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207731 lncRNA upstream 217 74015591 ~ 74015797 (+) True G183108
TU207721 lncRNA upstream 18788 73996704 ~ 73997226 (+) True G183101
TU207720 lncRNA upstream 20071 73995682 ~ 73995943 (+) True G183100
TU207719 lncRNA upstream 20410 73995155 ~ 73995604 (+) True G183099
TU207706 lncRNA upstream 24374 73991365 ~ 73991640 (+) True G183091
TU207744 lncRNA downstream 1813 74018173 ~ 74034081 (+) True G183119
TU207780 lncRNA downstream 44536 74060896 ~ 74129871 (+) False G183152
TU207781 lncRNA downstream 99726 74116086 ~ 74129871 (+) True G183152
TU207798 lncRNA downstream 124987 74141347 ~ 74141645 (+) True G183168
TU207805 lncRNA downstream 138886 74155246 ~ 74155558 (+) True G183175
XM_021571532.2 mRNA upstream 5455 73999269 ~ 74010559 (+) True LOC110495967
XM_021571519.2 mRNA upstream 31277 73883551 ~ 73984737 (+) False LOC110495946
XM_021571589.2 mRNA downstream 53604 74069964 ~ 74104249 (+) False LOC110495989
XM_021571578.2 mRNA downstream 53606 74069966 ~ 74110824 (+) True LOC110495989
XM_021571609.2 mRNA downstream 109863 74126223 ~ 74139502 (+) True LOC110495996
XM_021571685.2 mRNA downstream 162123 74178483 ~ 74198686 (+) False LOC110496029
XM_021571668.2 mRNA downstream 162218 74178578 ~ 74198686 (+) False LOC110496029
TU206688 other upstream 391496 73622536 ~ 73624518 (+) True G182144
TU206683 other upstream 405777 73606892 ~ 73610237 (+) True G182139
TU206574 other upstream 435939 73576765 ~ 73580075 (+) True LOC110501876
TU206530 other upstream 673737 73341380 ~ 73342277 (+) False G181995
TU208054 other downstream 513289 74529649 ~ 74535026 (+) True G183361
TU208178 other downstream 695221 74711581 ~ 74714114 (+) False LOC110496107
TU208835 other downstream 869738 74886098 ~ 74886500 (+) True LOC110496116
TU209105 other downstream 1020892 75037252 ~ 75041090 (+) False LOC110496136
TU209106 other downstream 1070262 75086622 ~ 75087407 (+) False LOC110496136

Expression Profile