RNA id: TU208337



Basic Information


Item Value
RNA id TU208337
length 202
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G183631
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74144585 ~ 74144786 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAATTATTAACTTAACCATGCTTAAAGAAATAttaaatgtctgatttgttattttttacccatctacaatCACTACCCTTCTTTATAAGGCTTTCAAAAagttccctggtctttgtagttgaatcgtTGCTTGAAAATCAATattagactgagggaccttacagatgttcaTAACCCTTCATTTTACAGTCTGGTAATTACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU208303 lncRNA downstream 1532 74141037 ~ 74143053 (-) True G183602
TU208298 lncRNA downstream 24317 74119058 ~ 74120268 (-) True LOC118941541
TU208244 lncRNA downstream 124489 74019259 ~ 74020096 (-) True G183544
TU207735 lncRNA downstream 130204 74010498 ~ 74014381 (-) True LOC110495977
TU207718 lncRNA downstream 149584 73994721 ~ 73995001 (-) True G183098
TU208418 lncRNA upstream 52086 74196872 ~ 74198670 (-) True G183672
TU208302 lncRNA upstream 70531 74215317 ~ 74221649 (-) True G183601
TU208362 lncRNA upstream 96451 74241237 ~ 74251039 (-) False LOC110501892
TU208363 lncRNA upstream 96451 74241237 ~ 74251039 (-) False LOC110501892
TU208372 lncRNA upstream 96451 74241237 ~ 74251039 (-) False LOC110501892
XR_005037845.1 mRNA downstream 3709 74119066 ~ 74140876 (-) False LOC118941541
XM_021571622.2 mRNA downstream 18376 74122283 ~ 74126209 (-) True LOC110496007
XM_036955467.1 mRNA downstream 18625 74122283 ~ 74125960 (-) False LOC110496007
LOC110501884 mRNA downstream 31738 74111978 ~ 74112847 (-) True LOC110501884
XM_021571562.2 mRNA downstream 77475 74018519 ~ 74067110 (-) True LOC110495986
XM_036955486.1 mRNA upstream 12287 74157073 ~ 74167350 (-) False LOC110496015
XM_036955490.1 mRNA upstream 16269 74161055 ~ 74167349 (-) False LOC110496015
XM_036955479.1 mRNA upstream 19346 74164132 ~ 74167340 (-) True LOC110496015
XM_036955505.1 mRNA upstream 96451 74241237 ~ 74303895 (-) False LOC110501892
XM_036955506.1 mRNA upstream 96451 74241237 ~ 74303895 (-) False LOC110501892
TU208238 other downstream 33794 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 151040 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 468162 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 798738 73344950 ~ 73345847 (-) True G182708
TU207075 other downstream 1066206 73076027 ~ 73078379 (-) True LOC110495704
TU208774 other upstream 586086 74730872 ~ 74732637 (-) True G184006
TU210008 other upstream 1461441 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 1732573 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 1840373 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 1948384 76093170 ~ 76099850 (-) True adm2b

Expression Profile