RNA id: TU208573


Basic Information

Item Value
RNA id TU208573
length 267
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G183817
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74440610 ~ 74440876 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gctattatgagcccctcctttatagtagaatcctcaaatcagtttctaaagatggtgacatctagtggaagccctaggaagtacATCCTCATTCATATCTCACTGGGATTTCAATAGACAATGTTTTGAAAatcgatttctcacttcctgtttggatttcttctcatgTTTCTGCCtgacatatgagttctgttatactcacagacatcattcaaacagttttagaaacttcagagtgttttctatccaatacgaataataatatgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU208505 lncRNA downstream 70803 74355650 ~ 74369807 (-) True G183754
TU208514 lncRNA downstream 77884 74361826 ~ 74362726 (-) True G183760
TU208402 lncRNA downstream 105992 74333024 ~ 74334618 (-) True G183656
TU208463 lncRNA downstream 154296 74285609 ~ 74286314 (-) True G183714
TU208400 lncRNA downstream 189509 74241450 ~ 74251101 (-) True LOC110501892
TU208575 lncRNA upstream 744 74441620 ~ 74441903 (-) True G183819
TU208511 lncRNA upstream 10087 74450963 ~ 74451394 (-) True G183757
TU208662 lncRNA upstream 123046 74563922 ~ 74564654 (-) False G183903
TU208661 lncRNA upstream 123293 74564169 ~ 74564654 (-) True G183903
TU208588 lncRNA upstream 128084 74568960 ~ 74594420 (-) True LOC110496093
XM_036955502.1 mRNA downstream 7388 74241237 ~ 74433222 (-) False LOC110501892
XM_036955504.1 mRNA downstream 36725 74241237 ~ 74403885 (-) False LOC110501892
XM_036955499.1 mRNA downstream 80504 74241237 ~ 74360106 (-) False LOC110501892
XM_036955495.1 mRNA downstream 91258 74241237 ~ 74349352 (-) False LOC110501892
XM_036955497.1 mRNA downstream 91258 74241237 ~ 74349352 (-) False LOC110501892
XM_021571730.2 mRNA upstream 11656 74452532 ~ 74458312 (-) False LOC110496063
XM_021571763.2 mRNA upstream 11656 74452532 ~ 74473027 (-) False LOC110496063
XM_021571755.2 mRNA upstream 11656 74452532 ~ 74473040 (-) False LOC110496063
XM_021571739.2 mRNA upstream 11656 74452532 ~ 74473298 (-) False LOC110496063
XM_021571768.2 mRNA upstream 11656 74452532 ~ 74473300 (-) False LOC110496063
TU208238 other downstream 329819 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 447065 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 764187 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 1094763 73344950 ~ 73345847 (-) True G182708
TU207075 other downstream 1362231 73076027 ~ 73078379 (-) True LOC110495704
TU208774 other upstream 289996 74730872 ~ 74732637 (-) True G184006
TU210008 other upstream 1165351 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 1436483 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 1544283 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 1652294 76093170 ~ 76099850 (-) True adm2b

Expression Profile