RNA id: TU208793



Basic Information


Item Value
RNA id TU208793
length 286
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G184025
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74753727 ~ 74754012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggggggggggggtactgtcatgtctactccctctccccctaTATGACTGACGGTTTACTAATCACTGGCTCTGACAACCTTAATTACGCACAACTGGCACCATCGTTACTCGGATTGGTGCTTCATCATGAGACAGTCCTGGACTCCATCACATCACTGATTACCTCCCCTGTATCTATCACTCCCTTAGTTTCATTCCCCAGGCAGTATTGGTTATGTGTTTCATGTCCAGACGCTACTCTTGTTTTGTATCGTTAGATGTTCATTgcattattaaactcacca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU208766 lncRNA downstream 3750 74714130 ~ 74749977 (-) True G183998
TU208780 lncRNA downstream 14346 74738695 ~ 74739381 (-) True G184012
TU208730 lncRNA downstream 85260 74666945 ~ 74668467 (-) True G183969
TU208588 lncRNA downstream 159307 74568960 ~ 74594420 (-) True LOC110496093
TU208662 lncRNA downstream 189073 74563922 ~ 74564654 (-) False G183903
TU209291 lncRNA upstream 255092 75009104 ~ 75037526 (-) False G184488
TU209289 lncRNA upstream 265813 75019825 ~ 75032517 (-) False G184488
TU209285 lncRNA upstream 281452 75035464 ~ 75048734 (-) True G184488
TU209299 lncRNA upstream 284269 75038281 ~ 75043854 (-) True G184493
TU209303 lncRNA upstream 295841 75049853 ~ 75050060 (-) True G184497
XM_021571790.2 mRNA downstream 159301 74533285 ~ 74594426 (-) False LOC110496093
XR_005034539.1 mRNA downstream 245622 74501414 ~ 74508105 (-) True LOC118937295
XM_021571746.2 mRNA downstream 280411 74452532 ~ 74473316 (-) True LOC110496063
XM_036955509.1 mRNA downstream 280425 74452532 ~ 74473302 (-) False LOC110496063
XM_036955510.1 mRNA downstream 280427 74452532 ~ 74473300 (-) False LOC110496063
XM_021571925.2 mRNA upstream 602559 75356571 ~ 75361242 (-) True LOC110496174
XR_005037884.1 mRNA upstream 824838 75578850 ~ 75582017 (-) True LOC110501959
XR_005037885.1 mRNA upstream 830545 75584557 ~ 75585136 (-) True LOC118936395
XM_021571935.2 mRNA upstream 841354 75595366 ~ 75605880 (-) False LOC110496186
XM_036955575.1 mRNA upstream 841354 75595366 ~ 75607735 (-) False LOC110496186
TU208774 other downstream 21090 74730872 ~ 74732637 (-) True G184006
TU208238 other downstream 642936 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 760182 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 1077304 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 1407880 73344950 ~ 73345847 (-) True G182708
TU210008 other upstream 852215 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 1123347 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 1231147 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 1339158 76093170 ~ 76099850 (-) True adm2b
TU211216 other upstream 1519512 76273524 ~ 76293392 (-) False G186197

Expression Profile