RNA id: TU209304



Basic Information


Item Value
RNA id TU209304
length 209
lncRNA type intronic
GC content 0.39
exon number 1
gene id G184498
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75051304 ~ 75051512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTGAAGTGCAGAGAGCCAGTGATGACTGCATGGGAAACGTGCTGCTGCaggctgctgtgttgtgttggaattATTCCAGCTCACCTCTGTTTATTGGCATATTACATGGCCCTGCCATCTCTCATGGAGGCTGGAAAGTCCCCAGCCAGCCACAGCAGCAGATCCCATCTCACTAATGCTGTTGCACAACTCTCAATCACTTTAATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209303 lncRNA downstream 1244 75049853 ~ 75050060 (-) True G184497
TU209285 lncRNA downstream 2570 75035464 ~ 75048734 (-) True G184488
TU209299 lncRNA downstream 7450 75038281 ~ 75043854 (-) True G184493
TU209291 lncRNA downstream 13778 75009104 ~ 75037526 (-) False G184488
TU209289 lncRNA downstream 18787 75019825 ~ 75032517 (-) False G184488
TU209305 lncRNA upstream 350 75051862 ~ 75052108 (-) True G184499
TU209307 lncRNA upstream 1454 75052966 ~ 75053236 (-) True G184501
TU209312 lncRNA upstream 9307 75060819 ~ 75069840 (-) True G184506
TU209317 lncRNA upstream 18786 75070298 ~ 75070515 (-) True G184511
TU209318 lncRNA upstream 21322 75072834 ~ 75073131 (-) True G184512
XM_021571790.2 mRNA downstream 456878 74533285 ~ 74594426 (-) False LOC110496093
XR_005034539.1 mRNA downstream 543199 74501414 ~ 74508105 (-) True LOC118937295
XM_021571746.2 mRNA downstream 577988 74452532 ~ 74473316 (-) True LOC110496063
XM_036955509.1 mRNA downstream 578002 74452532 ~ 74473302 (-) False LOC110496063
XM_036955510.1 mRNA downstream 578004 74452532 ~ 74473300 (-) False LOC110496063
XM_021571925.2 mRNA upstream 305059 75356571 ~ 75361242 (-) True LOC110496174
XR_005037884.1 mRNA upstream 527338 75578850 ~ 75582017 (-) True LOC110501959
XR_005037885.1 mRNA upstream 533045 75584557 ~ 75585136 (-) True LOC118936395
XM_021571935.2 mRNA upstream 543854 75595366 ~ 75605880 (-) False LOC110496186
XM_036955575.1 mRNA upstream 543854 75595366 ~ 75607735 (-) False LOC110496186
TU208774 other downstream 318667 74730872 ~ 74732637 (-) True G184006
TU208238 other downstream 940513 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 1057759 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 1374881 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 1705457 73344950 ~ 73345847 (-) True G182708
TU210008 other upstream 554715 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 825847 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 933647 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 1041658 76093170 ~ 76099850 (-) True adm2b
TU211216 other upstream 1222012 76273524 ~ 76293392 (-) False G186197

Expression Profile