RNA id: TU209152


Basic Information

Item Value
RNA id TU209152
length 209
lncRNA type intronic
GC content 0.50
exon number 1
gene id G184359
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75081821 ~ 75082029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

actatttctctctataccatttgtatttcatgcctttgactattggatgttgttataggcactttagtattgccagtctaatgttgggagttgataggcttaaagtcataaacagagctgtgcttcaagcattgctaagagctgctggcaaacacagtaaagtgctgtttgaatgaatgcttacgagcctgttgctgcctaccaccgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209151 lncRNA upstream 1658 75079932 ~ 75080163 (+) True G184358
TU209134 lncRNA upstream 24036 75056997 ~ 75057785 (+) True G184341
TU209128 lncRNA upstream 35895 75039765 ~ 75045926 (+) True G184335
TU209125 lncRNA upstream 46878 75019103 ~ 75034943 (+) True G184332
TU208893 lncRNA upstream 200703 74878646 ~ 74881118 (+) True G184122
TU209153 lncRNA downstream 378 75082407 ~ 75082650 (+) True G184360
TU209154 lncRNA downstream 1449 75083478 ~ 75083777 (+) True G184361
TU209158 lncRNA downstream 6873 75088902 ~ 75089146 (+) True G184365
TU209169 lncRNA downstream 39145 75121174 ~ 75121414 (+) True G184376
TU209177 lncRNA downstream 47505 75129534 ~ 75129742 (+) True G184384
XM_036934200.1 mRNA upstream 93130 74971238 ~ 74988691 (+) True LOC118936821
XM_036955513.1 mRNA upstream 118831 74910467 ~ 74962990 (+) False LOC110496126
XM_036955531.1 mRNA downstream 59973 75142002 ~ 75256839 (+) False LOC110501950
XM_036955521.1 mRNA downstream 65144 75147173 ~ 75256839 (+) False LOC110501950
XM_036955523.1 mRNA downstream 65144 75147173 ~ 75256839 (+) False LOC110501950
XM_036955525.1 mRNA downstream 65144 75147173 ~ 75256839 (+) False LOC110501950
XM_036955529.1 mRNA downstream 65144 75147173 ~ 75256839 (+) False LOC110501950
TU209105 other upstream 40731 75037252 ~ 75041090 (+) False LOC110496136
TU208835 other upstream 195321 74886098 ~ 74886500 (+) True LOC110496116
TU208178 other upstream 367707 74711581 ~ 74714114 (+) False LOC110496107
TU208054 other upstream 546795 74529649 ~ 74535026 (+) True G183361
TU206688 other upstream 1457303 73622536 ~ 73624518 (+) True G182144
TU209106 other downstream 4593 75086622 ~ 75087407 (+) False LOC110496136
TU210196 other downstream 1085628 76167657 ~ 76169295 (+) False LOC110496459
TU210197 other downstream 1085628 76167657 ~ 76169295 (+) True LOC110496459
TU210392 other downstream 1351788 76433817 ~ 76434615 (+) True G185462
TU210492 other downstream 1452349 76534378 ~ 76606975 (+) True G185549

Expression Profile