RNA id: TU209525



Basic Information


Item Value
RNA id TU209525
length 218
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G184710
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75339208 ~ 75339466 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctccaaccctgtttgtGAAtaactaccctcctgtaggttcactccaaccttgttcctggagagctaccctcctgtaggttcactccaaccctgttcgtgGATAACcgccctcctgtaggttcacttcttgttcctggagagcaaccctcctgtaggttcactccaaccctgttcgtgGATaaccaccctcctgtaggttcacttCAACCCTGTccccg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209524 lncRNA downstream 432 75338561 ~ 75338776 (-) True G184709
TU209523 lncRNA downstream 1112 75337894 ~ 75338096 (-) True G184708
TU209521 lncRNA downstream 2870 75336131 ~ 75336338 (-) True G184706
TU209515 lncRNA downstream 9696 75328771 ~ 75329512 (-) True G184700
TU209516 lncRNA downstream 10805 75327882 ~ 75328403 (-) True G184701
TU209528 lncRNA upstream 3950 75343416 ~ 75343633 (-) True G184713
TU209530 lncRNA upstream 4686 75344152 ~ 75344359 (-) True G184715
TU209532 lncRNA upstream 7249 75346715 ~ 75346954 (-) True G184717
TU209545 lncRNA upstream 14543 75354009 ~ 75354449 (-) True G184730
TU209546 lncRNA upstream 16421 75355887 ~ 75356333 (-) True G184731
XM_021571790.2 mRNA downstream 744782 74533285 ~ 74594426 (-) False LOC110496093
XR_005034539.1 mRNA downstream 831103 74501414 ~ 74508105 (-) True LOC118937295
XM_021571746.2 mRNA downstream 865892 74452532 ~ 74473316 (-) True LOC110496063
XM_036955509.1 mRNA downstream 865906 74452532 ~ 74473302 (-) False LOC110496063
XM_036955510.1 mRNA downstream 865908 74452532 ~ 74473300 (-) False LOC110496063
XM_021571925.2 mRNA upstream 17105 75356571 ~ 75361242 (-) True LOC110496174
XR_005037884.1 mRNA upstream 239384 75578850 ~ 75582017 (-) True LOC110501959
XR_005037885.1 mRNA upstream 245091 75584557 ~ 75585136 (-) True LOC118936395
XM_021571935.2 mRNA upstream 255900 75595366 ~ 75605880 (-) False LOC110496186
XM_036955575.1 mRNA upstream 255900 75595366 ~ 75607735 (-) False LOC110496186
TU208774 other downstream 606571 74730872 ~ 74732637 (-) True G184006
TU208238 other downstream 1228417 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 1345663 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 1662785 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 1993361 73344950 ~ 73345847 (-) True G182708
TU210008 other upstream 266761 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 537893 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 645693 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 753704 76093170 ~ 76099850 (-) True adm2b
TU211216 other upstream 934058 76273524 ~ 76293392 (-) False G186197

Expression Profile