Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210088 |
| length | 556 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G185204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 75842626 ~ 75843401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210076 | lncRNA | upstream | 2302 | 75839777 ~ 75840544 (+) | True | ptprq |
| TU210070 | lncRNA | upstream | 45265 | 75797248 ~ 75797581 (+) | True | otogl |
| TU210067 | lncRNA | upstream | 61694 | 75773766 ~ 75781152 (+) | True | G185186 |
| TU209784 | lncRNA | upstream | 181204 | 75656200 ~ 75661642 (+) | True | gcsha |
| TU210090 | lncRNA | downstream | 360 | 75843761 ~ 75845575 (+) | False | G185205 |
| TU210091 | lncRNA | downstream | 360 | 75843761 ~ 75844067 (+) | True | G185205 |
| TU210097 | lncRNA | downstream | 12728 | 75856129 ~ 75856857 (+) | True | G185211 |
| TU210114 | lncRNA | downstream | 140649 | 75984050 ~ 75984401 (+) | True | G185228 |
| TU210222 | lncRNA | downstream | 260722 | 76104123 ~ 76104424 (+) | True | G185326 |
| XM_036955622.1 | mRNA | upstream | 300 | 75798506 ~ 75842546 (+) | False | ptprq |
| XM_036955623.1 | mRNA | upstream | 300 | 75798506 ~ 75842546 (+) | False | ptprq |
| XM_036955624.1 | mRNA | upstream | 300 | 75798506 ~ 75842546 (+) | False | ptprq |
| XM_036955629.1 | mRNA | upstream | 300 | 75798506 ~ 75842546 (+) | False | ptprq |
| XM_036955641.1 | mRNA | upstream | 11374 | 75829380 ~ 75831472 (+) | True | LOC118942030 |
| XM_021572129.2 | mRNA | downstream | 50788 | 75894189 ~ 75902042 (+) | False | LOC110496295 |
| XM_021572122.2 | mRNA | downstream | 50954 | 75894355 ~ 75902042 (+) | False | LOC110496295 |
| XM_021572113.2 | mRNA | downstream | 50956 | 75894357 ~ 75902042 (+) | True | LOC110496295 |
| XM_021572140.2 | mRNA | downstream | 72236 | 75915637 ~ 75935997 (+) | True | LOC110496313 |
| XM_036955699.1 | mRNA | downstream | 96368 | 75939769 ~ 75982606 (+) | False | LOC110496319 |
| TU209106 | other | upstream | 755439 | 75086622 ~ 75087407 (+) | False | LOC110496136 |
| TU209105 | other | upstream | 801756 | 75037252 ~ 75041090 (+) | False | LOC110496136 |
| TU208835 | other | upstream | 956346 | 74886098 ~ 74886500 (+) | True | LOC110496116 |
| TU208178 | other | upstream | 1128732 | 74711581 ~ 74714114 (+) | False | LOC110496107 |
| TU208054 | other | upstream | 1307820 | 74529649 ~ 74535026 (+) | True | G183361 |
| TU210196 | other | downstream | 324256 | 76167657 ~ 76169295 (+) | False | LOC110496459 |
| TU210197 | other | downstream | 324256 | 76167657 ~ 76169295 (+) | True | LOC110496459 |
| TU210392 | other | downstream | 590416 | 76433817 ~ 76434615 (+) | True | G185462 |
| TU210492 | other | downstream | 690977 | 76534378 ~ 76606975 (+) | True | G185549 |
| TU210702 | other | downstream | 987012 | 76830413 ~ 76832500 (+) | True | G185718 |
