RNA id: TU210097


Basic Information

Item Value
RNA id TU210097
length 243
lncRNA type intronic
GC content 0.41
exon number 2
gene id G185211
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75856129 ~ 75856857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaaagagacaggtccaatgaaaaaaagagagagaaagagagacagagaaagagacaggtccaatgaaagagagagagtgaaagagaaagagagacagagaaagagacaggtccaatgaaaaagagagagaaagagaaagagagacaggtccaatgaaagagagagagtgaaagagaaagagagacagagaaagagacaggtccaatgaaaaagagagagtgaaagagagacagagaaagagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210090 lncRNA upstream 10554 75843761 ~ 75845575 (+) False G185205
TU210091 lncRNA upstream 12062 75843761 ~ 75844067 (+) True G185205
TU210088 lncRNA upstream 12728 75842846 ~ 75843401 (+) True G185204
TU210089 lncRNA upstream 12930 75842626 ~ 75843199 (+) False G185204
TU210076 lncRNA upstream 15585 75839777 ~ 75840544 (+) True ptprq
TU210114 lncRNA downstream 127193 75984050 ~ 75984401 (+) True G185228
TU210222 lncRNA downstream 247266 76104123 ~ 76104424 (+) True G185326
TU210252 lncRNA downstream 293678 76150535 ~ 76150879 (+) True G185352
TU210272 lncRNA downstream 330718 76187575 ~ 76187870 (+) True G185367
TU210281 lncRNA downstream 346399 76203256 ~ 76204036 (+) True G185376
XM_036955622.1 mRNA upstream 13583 75798506 ~ 75842546 (+) False ptprq
XM_036955623.1 mRNA upstream 13583 75798506 ~ 75842546 (+) False ptprq
XM_036955624.1 mRNA upstream 13583 75798506 ~ 75842546 (+) False ptprq
XM_036955629.1 mRNA upstream 13583 75798506 ~ 75842546 (+) False ptprq
XM_036955641.1 mRNA upstream 24657 75829380 ~ 75831472 (+) True LOC118942030
XM_021572129.2 mRNA downstream 37332 75894189 ~ 75902042 (+) False LOC110496295
XM_021572122.2 mRNA downstream 37498 75894355 ~ 75902042 (+) False LOC110496295
XM_021572113.2 mRNA downstream 37500 75894357 ~ 75902042 (+) True LOC110496295
XM_021572140.2 mRNA downstream 58780 75915637 ~ 75935997 (+) True LOC110496313
XM_036955699.1 mRNA downstream 82912 75939769 ~ 75982606 (+) False LOC110496319
TU209106 other upstream 768722 75086622 ~ 75087407 (+) False LOC110496136
TU209105 other upstream 815039 75037252 ~ 75041090 (+) False LOC110496136
TU208835 other upstream 969629 74886098 ~ 74886500 (+) True LOC110496116
TU208178 other upstream 1142015 74711581 ~ 74714114 (+) False LOC110496107
TU208054 other upstream 1321103 74529649 ~ 74535026 (+) True G183361
TU210196 other downstream 310800 76167657 ~ 76169295 (+) False LOC110496459
TU210197 other downstream 310800 76167657 ~ 76169295 (+) True LOC110496459
TU210392 other downstream 576960 76433817 ~ 76434615 (+) True G185462
TU210492 other downstream 677521 76534378 ~ 76606975 (+) True G185549
TU210702 other downstream 973556 76830413 ~ 76832500 (+) True G185718

Expression Profile