RNA id: TU210252



Basic Information


Item Value
RNA id TU210252
length 303
lncRNA type antisense_over
GC content 0.65
exon number 2
gene id G185352
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 76150535 ~ 76150879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAAAAGGGCTGAAAGTCAGTGAACTTGGCCCAGCCCTTCTCAGCCTCTGTAGTTACAGGCTGTGGGGCGGGACTTCCCCATGCGTCTACGGCCACTCCGTGCTTGGGGGCAGGGCTGTCCCATGGGTCTACGCCCACTCCAGGCGTGGGGGCGGGGCTACCCCATGGGTCTACACCCACTCCAGGCGTGGGGGCGGGGCTACCCCATGGGTCTACACCCACTCCAGGCTTGGGGGCGGGGCTACCCCATGGGTCCACTCCAGATGAGGGGGAGTTAAAGTTCACCTCCCCGAAACTAGCCGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210222 lncRNA upstream 46111 76104123 ~ 76104424 (+) True G185326
TU210114 lncRNA upstream 166134 75984050 ~ 75984401 (+) True G185228
TU210097 lncRNA upstream 293678 75856129 ~ 75856857 (+) True G185211
TU210090 lncRNA upstream 304960 75843761 ~ 75845575 (+) False G185205
TU210091 lncRNA upstream 306468 75843761 ~ 75844067 (+) True G185205
TU210272 lncRNA downstream 36696 76187575 ~ 76187870 (+) True G185367
TU210281 lncRNA downstream 52377 76203256 ~ 76204036 (+) True G185376
TU210344 lncRNA downstream 149456 76300335 ~ 76300615 (+) True G185424
TU210356 lncRNA downstream 158075 76308954 ~ 76310593 (+) True G185431
TU210380 lncRNA downstream 193113 76343992 ~ 76344405 (+) True G185450
XM_021572340.2 mRNA upstream 83856 76053982 ~ 76066679 (+) True lmf2a
XM_021572274.2 mRNA upstream 97392 75993883 ~ 76053143 (+) False c2cd5
XM_021572387.2 mRNA downstream 16694 76167573 ~ 76181555 (+) False LOC110496459
XM_036955859.1 mRNA downstream 115524 76266403 ~ 76272163 (+) True LOC110496485
XM_036955869.1 mRNA downstream 122633 76273512 ~ 76293411 (+) False cd9a
XM_036955873.1 mRNA downstream 125523 76276402 ~ 76293411 (+) True cd9a
XM_021572486.2 mRNA downstream 238650 76389529 ~ 76398538 (+) False LOC110496527
TU209106 other upstream 1063128 75086622 ~ 75087407 (+) False LOC110496136
TU209105 other upstream 1109445 75037252 ~ 75041090 (+) False LOC110496136
TU208835 other upstream 1264035 74886098 ~ 74886500 (+) True LOC110496116
TU208178 other upstream 1436421 74711581 ~ 74714114 (+) False LOC110496107
TU208054 other upstream 1615509 74529649 ~ 74535026 (+) True G183361
TU210196 other downstream 16778 76167657 ~ 76169295 (+) False LOC110496459
TU210197 other downstream 16778 76167657 ~ 76169295 (+) True LOC110496459
TU210392 other downstream 282938 76433817 ~ 76434615 (+) True G185462
TU210492 other downstream 383499 76534378 ~ 76606975 (+) True G185549
TU210702 other downstream 679534 76830413 ~ 76832500 (+) True G185718

Expression Profile