Item | Value |
---|---|
RNA id | TU212273 |
length | 285 |
lncRNA type | inter_gene |
GC content | 0.42 |
exon number | 1 |
gene id | G187154 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 77931363 ~ 77931647 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU212270 | lncRNA | upstream | 1272 | 77929784 ~ 77930091 (+) | True | G187151 |
TU212262 | lncRNA | upstream | 7510 | 77923652 ~ 77923853 (+) | True | G187143 |
TU212257 | lncRNA | upstream | 13759 | 77917397 ~ 77917604 (+) | True | G187138 |
TU212244 | lncRNA | upstream | 35209 | 77892824 ~ 77896154 (+) | True | G187125 |
TU212148 | lncRNA | upstream | 164509 | 77766622 ~ 77766854 (+) | True | G187052 |
TU212305 | lncRNA | downstream | 65073 | 77996720 ~ 77999680 (+) | False | fbxl13 |
TU212304 | lncRNA | downstream | 70309 | 78001956 ~ 78002905 (+) | True | fbxl13 |
TU212347 | lncRNA | downstream | 127721 | 78059368 ~ 78066821 (+) | True | LOC110502077 |
TU212353 | lncRNA | downstream | 139595 | 78071242 ~ 78073026 (+) | True | G187221 |
TU212354 | lncRNA | downstream | 141708 | 78073355 ~ 78073712 (+) | False | G187222 |
XM_036956070.1 | mRNA | upstream | 49155 | 77838768 ~ 77882208 (+) | False | LOC110502056 |
XM_036956064.1 | mRNA | upstream | 49155 | 77851929 ~ 77882208 (+) | True | LOC110502056 |
XM_021572799.2 | mRNA | upstream | 150568 | 77777066 ~ 77780795 (+) | False | LOC110496763 |
XM_021572757.2 | mRNA | upstream | 214575 | 77702227 ~ 77716788 (+) | False | nfat5a |
NM_001124273.1 | mRNA | downstream | 31854 | 77963501 ~ 77969044 (+) | True | LOC100135906 |
XM_021572820.2 | mRNA | downstream | 40197 | 77971844 ~ 78003571 (+) | False | fbxl13 |
XM_036956097.1 | mRNA | downstream | 115726 | 78047373 ~ 78066844 (+) | False | LOC110502077 |
XM_036956103.1 | mRNA | downstream | 115802 | 78047449 ~ 78066844 (+) | False | LOC110502077 |
XM_036956099.1 | mRNA | downstream | 115804 | 78047451 ~ 78066844 (+) | False | LOC110502077 |
TU212151 | other | upstream | 150570 | 77777127 ~ 77780793 (+) | True | LOC110496763 |
TU210667 | other | upstream | 770513 | 77147653 ~ 77160850 (+) | True | LOC110502025 |
TU210702 | other | upstream | 1098863 | 76830413 ~ 76832500 (+) | True | G185718 |
TU210492 | other | upstream | 1324388 | 76534378 ~ 76606975 (+) | True | G185549 |
TU210392 | other | upstream | 1496748 | 76433817 ~ 76434615 (+) | True | G185462 |
TU212344 | other | downstream | 116240 | 78047887 ~ 78048800 (+) | False | LOC110502077 |
TU212345 | other | downstream | 116240 | 78047887 ~ 78048800 (+) | False | LOC110502077 |
TU212400 | other | downstream | 205866 | 78137513 ~ 78177583 (+) | True | G187260 |
TU212466 | other | downstream | 335642 | 78267289 ~ 78270045 (+) | True | G187320 |
TU213209 | other | downstream | 553177 | 78484824 ~ 78506932 (+) | True | LOC110496993 |